| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315792
Identifier: 158315792
GI number: 158315792
Start: 4787834
End: 4788523
Strand: Reverse
Name: 158315792
Synonym: Franean1_4006
Alternate gene names: NA
Gene position: 4788523-4787834 (Counterclockwise)
Preceding gene: 158315793
Following gene: 158315791
Centisome position: 53.31
GC content: 70.43
Gene sequence:
>690_bases ATGATCAACGTCAAATGTGCCCTGGCACTCGCGGGAGGTTATGTCCTCGGCCGGACGAGGAAGGCCAAGGCGGCCATCGG CCTCGGGCTGTGGATCTCCGGTCGCAATTATCACGCGAAGGACGTCGTGCGCGACCAGGTGGTCCGGCTGTTGCGCTCCG CGGACGGCGAACAGCTGATCAACCAGATCAGGGGGCCGGCCACGGAAGCCGGCCGGCGCGCCGCGGTGGCGGTGTACGAG GCCCAGATCGATCGACTCTCCGATGCGCTGACCAAGCGCACGGAACGGCTGGCAGCGACGCTGGGCGACTCGGAGAAGGT TGTCCGAGACTCGGAGAAGGTTGTCCGGGAGGGAGCCGAGGCCGCCATCGAAGGCGTCGTCGGTGCCGTGACGCCCGGTA AGCTCCGTGATCGCAAAGGCGGCGGTCAGCCGTCCTCGGAGCGCGCCGACGAACGTGGCCCGAGCGGCAACGGCACGGTC GACGAGGACCGCGCTGAAACACAGACCGCCACCGGCCGCGACAGGACGGAAACAGGCCGCGCGACCGATCAGGACGACAG CGACGAGGGCGGGACGGAGCCCGCCGCCGAGCGGCGGGTCCCGGACAGGTCCGCCGGACCGCGCCGGGACACCGGCCGCG AACCACTCGAGCGGGCGGCGCAGGGATCCACCGGTGGAGGTGCGCGATGA
Upstream 100 bases:
>100_bases CGGACGGCGGCTCCTTCGGCGGGTCGGGCCGATGGGGCTGGGGCGAGGACAGAACCGGGTCTGACCGACCGAGCAAGGCC CGGGAGAGAGAGGAGCCTCG
Downstream 100 bases:
>100_bases CCCGGACGACGGAGCAACCACACGGCCTGGTCGGCGCCCTCCTGCGCAGTCCGGCGAGCAAGAGGCTCGCCGACCAGGCG GGAGACCTGGCGAAGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MINVKCALALAGGYVLGRTRKAKAAIGLGLWISGRNYHAKDVVRDQVVRLLRSADGEQLINQIRGPATEAGRRAAVAVYE AQIDRLSDALTKRTERLAATLGDSEKVVRDSEKVVREGAEAAIEGVVGAVTPGKLRDRKGGGQPSSERADERGPSGNGTV DEDRAETQTATGRDRTETGRATDQDDSDEGGTEPAAERRVPDRSAGPRRDTGREPLERAAQGSTGGGAR
Sequences:
>Translated_229_residues MINVKCALALAGGYVLGRTRKAKAAIGLGLWISGRNYHAKDVVRDQVVRLLRSADGEQLINQIRGPATEAGRRAAVAVYE AQIDRLSDALTKRTERLAATLGDSEKVVRDSEKVVREGAEAAIEGVVGAVTPGKLRDRKGGGQPSSERADERGPSGNGTV DEDRAETQTATGRDRTETGRATDQDDSDEGGTEPAAERRVPDRSAGPRRDTGREPLERAAQGSTGGGAR >Mature_229_residues MINVKCALALAGGYVLGRTRKAKAAIGLGLWISGRNYHAKDVVRDQVVRLLRSADGEQLINQIRGPATEAGRRAAVAVYE AQIDRLSDALTKRTERLAATLGDSEKVVRDSEKVVREGAEAAIEGVVGAVTPGKLRDRKGGGQPSSERADERGPSGNGTV DEDRAETQTATGRDRTETGRATDQDDSDEGGTEPAAERRVPDRSAGPRRDTGREPLERAAQGSTGGGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24240; Mature: 24240
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVKCALALAGGYVLGRTRKAKAAIGLGLWISGRNYHAKDVVRDQVVRLLRSADGEQLI CCCEEEEHEECCCHHCCCCHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHH NQIRGPATEAGRRAAVAVYEAQIDRLSDALTKRTERLAATLGDSEKVVRDSEKVVREGAE HHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AAIEGVVGAVTPGKLRDRKGGGQPSSERADERGPSGNGTVDEDRAETQTATGRDRTETGR HHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCC ATDQDDSDEGGTEPAAERRVPDRSAGPRRDTGREPLERAAQGSTGGGAR CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MINVKCALALAGGYVLGRTRKAKAAIGLGLWISGRNYHAKDVVRDQVVRLLRSADGEQLI CCCEEEEHEECCCHHCCCCHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHH NQIRGPATEAGRRAAVAVYEAQIDRLSDALTKRTERLAATLGDSEKVVRDSEKVVREGAE HHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AAIEGVVGAVTPGKLRDRKGGGQPSSERADERGPSGNGTVDEDRAETQTATGRDRTETGR HHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCC ATDQDDSDEGGTEPAAERRVPDRSAGPRRDTGREPLERAAQGSTGGGAR CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA