| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315791
Identifier: 158315791
GI number: 158315791
Start: 4786845
End: 4787837
Strand: Reverse
Name: 158315791
Synonym: Franean1_4005
Alternate gene names: NA
Gene position: 4787837-4786845 (Counterclockwise)
Preceding gene: 158315792
Following gene: 158315787
Centisome position: 53.3
GC content: 69.89
Gene sequence:
>993_bases ATGACCCGGACGACGGAGCAACCACACGGCCTGGTCGGCGCCCTCCTGCGCAGTCCGGCGAGCAAGAGGCTCGCCGACCA GGCGGGAGACCTGGCGAAGGCGGGCGGCAGCCGGCTGGCCGGGCGGGTCGGTGAGCGACTCACCTCCAGCACGGACAAAC TCAACGGTCTCAGCGACTCCGGCGGGCGGATCTCGTCGCTCGCCGAGGGCGCCGGGAGACTGGTCGAGGGCCAGTCTCCG CTGAAGGCGGCGGCCGGGACGATCATGTCGAACGTCAAGGACAAGGTGAAGGGGGCCCTCGGCGCCGCCAAGGGCAGGGC CGGCGGGAAGAGCGGGCCGCCCAAGGCGATGAACATCGAGGAGGCCGTGGACGTCGGCGTCCCGGTGTCGGTCGCCTACG ACCAGTGGACGCAGTACCCCGAGTTCGCCAAGTTCATGAAAGGCGTCGAGGCGGTCGAGACCAAGAGCGAGACCGAACAG AACTGGCGGGTCAAGGTCTTCCGCTCCAGGCGCAGCTGGCAGGCAAAGGTCACCGAGCAGATCCCCGACCGCCGGATCGT CTGGACATCCGAGGGAGCGAAGGGCTCGGTCAAGGGCGCCGTCACCTTCCACCCGCTCGCCGACGACCTGACGCGCGTGC TGCTGGCGATGGAGTACTACCCCAGCGGGTTCATGGAGAAGACCGGCAGCCTGTGGCGCGCCGGTGGGCGACGGGCCCGG CTGGATCTGAAACACTTCCGCCGCTTCGTCATGTTCAGTGGGGAGGCCACCGGCTCCTGGCGGGGCGAAATCCGGGACGG CAAGGTCGTTCGCTCCCCGGACGAGGACCAATCCGAACCCCGCGAAACCCGGGAGGAGGCGCGGAGCTCGGAAACCACGC AGGCCGCACAGGACAGTGACGACCAGGGCGCGGCGACGTCCGGGGAATCCGAGGTGCGGGCCGGGTCGAAGTCCGACCAG CCCGCCGGTGCCGACGAGCCTGTCCGAGCCTGA
Upstream 100 bases:
>100_bases CCGAGCGGCGGGTCCCGGACAGGTCCGCCGGACCGCGCCGGGACACCGGCCGCGAACCACTCGAGCGGGCGGCGCAGGGA TCCACCGGTGGAGGTGCGCG
Downstream 100 bases:
>100_bases GGCGGCCTCGTGGCCGGGCGTTACGGCCGTGTTCCGGGCCTCTTGCGCAGGGCCACATCGTCGCGGACGTCTTCCGTCAG GTTCGAGTGACCTGGATCGT
Product: cyclase/dehydrase
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTRTTEQPHGLVGALLRSPASKRLADQAGDLAKAGGSRLAGRVGERLTSSTDKLNGLSDSGGRISSLAEGAGRLVEGQSP LKAAAGTIMSNVKDKVKGALGAAKGRAGGKSGPPKAMNIEEAVDVGVPVSVAYDQWTQYPEFAKFMKGVEAVETKSETEQ NWRVKVFRSRRSWQAKVTEQIPDRRIVWTSEGAKGSVKGAVTFHPLADDLTRVLLAMEYYPSGFMEKTGSLWRAGGRRAR LDLKHFRRFVMFSGEATGSWRGEIRDGKVVRSPDEDQSEPRETREEARSSETTQAAQDSDDQGAATSGESEVRAGSKSDQ PAGADEPVRA
Sequences:
>Translated_330_residues MTRTTEQPHGLVGALLRSPASKRLADQAGDLAKAGGSRLAGRVGERLTSSTDKLNGLSDSGGRISSLAEGAGRLVEGQSP LKAAAGTIMSNVKDKVKGALGAAKGRAGGKSGPPKAMNIEEAVDVGVPVSVAYDQWTQYPEFAKFMKGVEAVETKSETEQ NWRVKVFRSRRSWQAKVTEQIPDRRIVWTSEGAKGSVKGAVTFHPLADDLTRVLLAMEYYPSGFMEKTGSLWRAGGRRAR LDLKHFRRFVMFSGEATGSWRGEIRDGKVVRSPDEDQSEPRETREEARSSETTQAAQDSDDQGAATSGESEVRAGSKSDQ PAGADEPVRA >Mature_329_residues TRTTEQPHGLVGALLRSPASKRLADQAGDLAKAGGSRLAGRVGERLTSSTDKLNGLSDSGGRISSLAEGAGRLVEGQSPL KAAAGTIMSNVKDKVKGALGAAKGRAGGKSGPPKAMNIEEAVDVGVPVSVAYDQWTQYPEFAKFMKGVEAVETKSETEQN WRVKVFRSRRSWQAKVTEQIPDRRIVWTSEGAKGSVKGAVTFHPLADDLTRVLLAMEYYPSGFMEKTGSLWRAGGRRARL DLKHFRRFVMFSGEATGSWRGEIRDGKVVRSPDEDQSEPRETREEARSSETTQAAQDSDDQGAATSGESEVRAGSKSDQP AGADEPVRA
Specific function: Unknown
COG id: COG5637
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 35452; Mature: 35321
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTTEQPHGLVGALLRSPASKRLADQAGDLAKAGGSRLAGRVGERLTSSTDKLNGLSDS CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC GGRISSLAEGAGRLVEGQSPLKAAAGTIMSNVKDKVKGALGAAKGRAGGKSGPPKAMNIE CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH EAVDVGVPVSVAYDQWTQYPEFAKFMKGVEAVETKSETEQNWRVKVFRSRRSWQAKVTEQ HHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH IPDRRIVWTSEGAKGSVKGAVTFHPLADDLTRVLLAMEYYPSGFMEKTGSLWRAGGRRAR CCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE LDLKHFRRFVMFSGEATGSWRGEIRDGKVVRSPDEDQSEPRETREEARSSETTQAAQDSD HHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DQGAATSGESEVRAGSKSDQPAGADEPVRA CCCCCCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRTTEQPHGLVGALLRSPASKRLADQAGDLAKAGGSRLAGRVGERLTSSTDKLNGLSDS CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC GGRISSLAEGAGRLVEGQSPLKAAAGTIMSNVKDKVKGALGAAKGRAGGKSGPPKAMNIE CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH EAVDVGVPVSVAYDQWTQYPEFAKFMKGVEAVETKSETEQNWRVKVFRSRRSWQAKVTEQ HHHHCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH IPDRRIVWTSEGAKGSVKGAVTFHPLADDLTRVLLAMEYYPSGFMEKTGSLWRAGGRRAR CCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEE LDLKHFRRFVMFSGEATGSWRGEIRDGKVVRSPDEDQSEPRETREEARSSETTQAAQDSD HHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DQGAATSGESEVRAGSKSDQPAGADEPVRA CCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA