Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158315646

Identifier: 158315646

GI number: 158315646

Start: 4583676

End: 4584665

Strand: Reverse

Name: 158315646

Synonym: Franean1_3856

Alternate gene names: NA

Gene position: 4584665-4583676 (Counterclockwise)

Preceding gene: 158315647

Following gene: 158315644

Centisome position: 51.04

GC content: 76.46

Gene sequence:

>990_bases
ATGGTCGTTGAGGCGCCGGCCGAGGCCGTAGGGCCCGAGCCCGCGTGCGGCCGGCGGCCGCCGGCGGGCTCGGCGAGCCA
CCGGTGGCGGACGGCCCTCGCCTGCGTCGTCCCGCTGCTCGCGGTGCTCTGGCTGCTCCACAGCTGGTCGACGGTCACGG
CGAGCGTCCGCCACCTGGCGGCCGCGCACCCGGGCTGGCTCGCCGTCGCGGTGCTCGCCGCCCTGCCGACCTGGATCGCG
GGAGCCGCCAGCCTGCAGGGGGCGGTCGCCCGGCGGCTGCCCGTCGGGCCGATGCTGGCCGTGCAGGTGGCGGGCAGCGT
CGCCAACCACGTGCTGCCCGCCGGCTTCGGCGTCGGGGCGGTGAAGCTGCGCTTCCTCAACCGGCACGGCGTCCCTCTGC
GCGAGGCGGTGGCCGCGGTCGGACTCGACGCCACCGCCGGAATGATCACCCATGTCGCGGTTCTCGTCGCGCTGCTCTCC
GGCGGGTTCCTGCACATGAGCGGGCCACCTGGTGGGCTGATCGCCACGGTGGCCGCCGTGGTGGCCGGGCTGCTCGCGGT
CGGCTGGGCCCTGCCGCCGATCCGGCGGGCGTGCCGGCGCGGCTGGACGCACGTGACGGCCCAGGCCCGGATGCTGGCGG
AGATCCTGCGGGTGCCGAGCCGGGCGGTGATGCTCTGGGGCGGCTCCACCGCGATCCCGCTCCTGCACGCGGCGACCCTG
CTGTTCGTGGTGCGGGCGCTACATCTCCCGCTGGGCGCCGGCGCGGTGTTCGCCATCTACTACCTGGCCAGCAGCGCGTC
CGCGCTCATCCCGTCGCCGGGCGGTTTCGGCTCGCTGGACGCGGCGCTGACCGCGGCGATCGTCGCGGCGGGGCAGTCAC
CCACCTCCGCCCTCGCCGCCGTCCTCGGGTACCGGCTGATCACGGTGTGGATCCCGCTCGCGCCCTCGGCCTGCGTCATG
GCGGCGCTGGTACGGCGGGGTCACCTCTGA

Upstream 100 bases:

>100_bases
GCGGCAGATGCCGAGGATGGGGCAGATGCCGTGGCCGGGGCCCGGGCGGCTGTCGCGGTGGGCGGCGCCCGGGTGGGCAT
GACGGTGCCGGAGCGCGGCG

Downstream 100 bases:

>100_bases
CCAGGGAACCCGCGTGTTAGATACAGGTCAATTCTTGCCGAAGGAGGACGCGGTGATCGACGTGGCGCGGCGGTTCGTCG
CCGCGATACAGGAGACCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MVVEAPAEAVGPEPACGRRPPAGSASHRWRTALACVVPLLAVLWLLHSWSTVTASVRHLAAAHPGWLAVAVLAALPTWIA
GAASLQGAVARRLPVGPMLAVQVAGSVANHVLPAGFGVGAVKLRFLNRHGVPLREAVAAVGLDATAGMITHVAVLVALLS
GGFLHMSGPPGGLIATVAAVVAGLLAVGWALPPIRRACRRGWTHVTAQARMLAEILRVPSRAVMLWGGSTAIPLLHAATL
LFVVRALHLPLGAGAVFAIYYLASSASALIPSPGGFGSLDAALTAAIVAAGQSPTSALAAVLGYRLITVWIPLAPSACVM
AALVRRGHL

Sequences:

>Translated_329_residues
MVVEAPAEAVGPEPACGRRPPAGSASHRWRTALACVVPLLAVLWLLHSWSTVTASVRHLAAAHPGWLAVAVLAALPTWIA
GAASLQGAVARRLPVGPMLAVQVAGSVANHVLPAGFGVGAVKLRFLNRHGVPLREAVAAVGLDATAGMITHVAVLVALLS
GGFLHMSGPPGGLIATVAAVVAGLLAVGWALPPIRRACRRGWTHVTAQARMLAEILRVPSRAVMLWGGSTAIPLLHAATL
LFVVRALHLPLGAGAVFAIYYLASSASALIPSPGGFGSLDAALTAAIVAAGQSPTSALAAVLGYRLITVWIPLAPSACVM
AALVRRGHL
>Mature_329_residues
MVVEAPAEAVGPEPACGRRPPAGSASHRWRTALACVVPLLAVLWLLHSWSTVTASVRHLAAAHPGWLAVAVLAALPTWIA
GAASLQGAVARRLPVGPMLAVQVAGSVANHVLPAGFGVGAVKLRFLNRHGVPLREAVAAVGLDATAGMITHVAVLVALLS
GGFLHMSGPPGGLIATVAAVVAGLLAVGWALPPIRRACRRGWTHVTAQARMLAEILRVPSRAVMLWGGSTAIPLLHAATL
LFVVRALHLPLGAGAVFAIYYLASSASALIPSPGGFGSLDAALTAAIVAAGQSPTSALAAVLGYRLITVWIPLAPSACVM
AALVRRGHL

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33444; Mature: 33444

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVEAPAEAVGPEPACGRRPPAGSASHRWRTALACVVPLLAVLWLLHSWSTVTASVRHLA
CCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
AAHPGWLAVAVLAALPTWIAGAASLQGAVARRLPVGPMLAVQVAGSVANHVLPAGFGVGA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH
VKLRFLNRHGVPLREAVAAVGLDATAGMITHVAVLVALLSGGFLHMSGPPGGLIATVAAV
HHHEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
VAGLLAVGWALPPIRRACRRGWTHVTAQARMLAEILRVPSRAVMLWGGSTAIPLLHAATL
HHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
LFVVRALHLPLGAGAVFAIYYLASSASALIPSPGGFGSLDAALTAAIVAAGQSPTSALAA
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
VLGYRLITVWIPLAPSACVMAALVRRGHL
HHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVVEAPAEAVGPEPACGRRPPAGSASHRWRTALACVVPLLAVLWLLHSWSTVTASVRHLA
CCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
AAHPGWLAVAVLAALPTWIAGAASLQGAVARRLPVGPMLAVQVAGSVANHVLPAGFGVGA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH
VKLRFLNRHGVPLREAVAAVGLDATAGMITHVAVLVALLSGGFLHMSGPPGGLIATVAAV
HHHEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
VAGLLAVGWALPPIRRACRRGWTHVTAQARMLAEILRVPSRAVMLWGGSTAIPLLHAATL
HHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
LFVVRALHLPLGAGAVFAIYYLASSASALIPSPGGFGSLDAALTAAIVAAGQSPTSALAA
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
VLGYRLITVWIPLAPSACVMAALVRRGHL
HHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA