Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yojK [H]

Identifier: 158315515

GI number: 158315515

Start: 4406517

End: 4407698

Strand: Reverse

Name: yojK [H]

Synonym: Franean1_3722

Alternate gene names: 158315515

Gene position: 4407698-4406517 (Counterclockwise)

Preceding gene: 158315516

Following gene: 158315510

Centisome position: 49.07

GC content: 70.81

Gene sequence:

>1182_bases
ATGTTCGTGGTACCACCGCTGGCCGGGCATGTGAACCCGGCCACCGCGGTAGCGGGGGAACTGGCCGCGCGCGGTCACCA
GGTGGCGATTGCCGGTCATGCCGACGTCATCGCGCCGATCGTACCGGCGAAGGTCGACCTGCTCGCGCTGTCCGGGAGAC
CGGCCGACGCCGCGGAGCGGACCAGAATAGAGGCCTCGTCCCAGCGGCTTCGTGGCGTAGCCGCGCTGAAGTTCCTCTGG
CAGGACTTTCTCCTCCCCCTCGGCGCGGCGATGATCCCGGAGATCGACGCCATGGCCAGCGAGTTCCGTCCCGACGTGGT
GGTCGCCGACCAGCAGGCTGTCGGCGCGTCGGTCGTGGCACGCCGACGAGGCACACGGCTAGCCGTCCTCGCCACCACGC
CCGCCGAGTTCGACGACCCCTACGCCGGGCTCGACCGCGTCGGCGCCTGGATCGCCGGACTGCTCCAGGACTTCCAACTC
GCCCACGGCATCCCCCCGGAACAGGCCGCGGCCACGGACCCCCGGTTCTCCGACCAGCTCACCCTCATCTGCTCCGTGCC
AGGCCTACTCAAAGCGGGCCGTTTCGCGGAATCAGTGGTCTTCGTCGGCTGCGCGGCCGCTCGGCGTCGTGCCGACCCGG
ACTTCCCCTGGACATGGCTGGACGAAACCCGGGCCACCGTCCTGATCTCACTCGGCACGGTCACCCGCGAGGCCGGCCGC
CGTTTCCTGCGCGCCGCCGCCGAGGCGATGCTGTCGATGGCCACCGACGTCCAGGCCGTCGTCGTCGCGCCACCGGGGAC
CGCCACCGACCTGGCCCTGGCGGCGCCCGCCGATCTCCTCGTCACACCACGCGTACCACAGCTCGCGTTGCTGCCACACC
TGGCCGCGGTGATCTGCCACGCCGGCAACAACACCGTGTGCGAATCGCTCGCACACGGAGTCCCACTCGTCGTCGCACCC
GTCCGCGACGACCAGCCCATCATCGCGGAACAGGTAGAACGAGCCGGAGCAGGCACCCGGATCCGATTCGGCCGTGCCGG
CGCGGCAACGATCGCCGATGCCCTGCGAAACGTGCTCGACGATCCGACCTACCGAGCGACCGCCGGGCGACTGCGACAGC
AGTTCACCGCCGCCGGCGGCACGGCCACAGCAGCGGCCCACATCGAGCAACTCGCCAGCTAG

Upstream 100 bases:

>100_bases
GCGAGAAAGTACCGCCGCCGGACCTCAGGGGCCCGGACCGCAACCCCGACGGTCGACTCCTGAGAACAACCCGGAACTCT
GGTGTGACATGGCAAGAATA

Downstream 100 bases:

>100_bases
TCGCGGTAGGGACCGCCCTTACGGGCGGCCCCCCGCACAGATCCCAGCGAGCGGAACTACCGCACTGGGCTCCTGCCTCG
GGTATTGGCGTCGAGCCGAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MFVVPPLAGHVNPATAVAGELAARGHQVAIAGHADVIAPIVPAKVDLLALSGRPADAAERTRIEASSQRLRGVAALKFLW
QDFLLPLGAAMIPEIDAMASEFRPDVVVADQQAVGASVVARRRGTRLAVLATTPAEFDDPYAGLDRVGAWIAGLLQDFQL
AHGIPPEQAAATDPRFSDQLTLICSVPGLLKAGRFAESVVFVGCAAARRRADPDFPWTWLDETRATVLISLGTVTREAGR
RFLRAAAEAMLSMATDVQAVVVAPPGTATDLALAAPADLLVTPRVPQLALLPHLAAVICHAGNNTVCESLAHGVPLVVAP
VRDDQPIIAEQVERAGAGTRIRFGRAGAATIADALRNVLDDPTYRATAGRLRQQFTAAGGTATAAAHIEQLAS

Sequences:

>Translated_393_residues
MFVVPPLAGHVNPATAVAGELAARGHQVAIAGHADVIAPIVPAKVDLLALSGRPADAAERTRIEASSQRLRGVAALKFLW
QDFLLPLGAAMIPEIDAMASEFRPDVVVADQQAVGASVVARRRGTRLAVLATTPAEFDDPYAGLDRVGAWIAGLLQDFQL
AHGIPPEQAAATDPRFSDQLTLICSVPGLLKAGRFAESVVFVGCAAARRRADPDFPWTWLDETRATVLISLGTVTREAGR
RFLRAAAEAMLSMATDVQAVVVAPPGTATDLALAAPADLLVTPRVPQLALLPHLAAVICHAGNNTVCESLAHGVPLVVAP
VRDDQPIIAEQVERAGAGTRIRFGRAGAATIADALRNVLDDPTYRATAGRLRQQFTAAGGTATAAAHIEQLAS
>Mature_393_residues
MFVVPPLAGHVNPATAVAGELAARGHQVAIAGHADVIAPIVPAKVDLLALSGRPADAAERTRIEASSQRLRGVAALKFLW
QDFLLPLGAAMIPEIDAMASEFRPDVVVADQQAVGASVVARRRGTRLAVLATTPAEFDDPYAGLDRVGAWIAGLLQDFQL
AHGIPPEQAAATDPRFSDQLTLICSVPGLLKAGRFAESVVFVGCAAARRRADPDFPWTWLDETRATVLISLGTVTREAGR
RFLRAAAEAMLSMATDVQAVVVAPPGTATDLALAAPADLLVTPRVPQLALLPHLAAVICHAGNNTVCESLAHGVPLVVAP
VRDDQPIIAEQVERAGAGTRIRFGRAGAATIADALRNVLDDPTYRATAGRLRQQFTAAGGTATAAAHIEQLAS

Specific function: Unknown

COG id: COG1819

COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glycosyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002213
- InterPro:   IPR006326 [H]

Pfam domain/function: PF00201 UDPGT [H]

EC number: NA

Molecular weight: Translated: 41068; Mature: 41068

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVVPPLAGHVNPATAVAGELAARGHQVAIAGHADVIAPIVPAKVDLLALSGRPADAAER
CEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCEEEEEECCCCCCHHHH
TRIEASSQRLRGVAALKFLWQDFLLPLGAAMIPEIDAMASEFRPDVVVADQQAVGASVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHHHH
RRRGTRLAVLATTPAEFDDPYAGLDRVGAWIAGLLQDFQLAHGIPPEQAAATDPRFSDQL
HCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
TLICSVPGLLKAGRFAESVVFVGCAAARRRADPDFPWTWLDETRATVLISLGTVTREAGR
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHH
RFLRAAAEAMLSMATDVQAVVVAPPGTATDLALAAPADLLVTPRVPQLALLPHLAAVICH
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHC
AGNNTVCESLAHGVPLVVAPVRDDQPIIAEQVERAGAGTRIRFGRAGAATIADALRNVLD
CCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHC
DPTYRATAGRLRQQFTAAGGTATAAAHIEQLAS
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MFVVPPLAGHVNPATAVAGELAARGHQVAIAGHADVIAPIVPAKVDLLALSGRPADAAER
CEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCEEEEEECCCCCCHHHH
TRIEASSQRLRGVAALKFLWQDFLLPLGAAMIPEIDAMASEFRPDVVVADQQAVGASVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHHHHHHH
RRRGTRLAVLATTPAEFDDPYAGLDRVGAWIAGLLQDFQLAHGIPPEQAAATDPRFSDQL
HCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
TLICSVPGLLKAGRFAESVVFVGCAAARRRADPDFPWTWLDETRATVLISLGTVTREAGR
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHH
RFLRAAAEAMLSMATDVQAVVVAPPGTATDLALAAPADLLVTPRVPQLALLPHLAAVICH
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHHHC
AGNNTVCESLAHGVPLVVAPVRDDQPIIAEQVERAGAGTRIRFGRAGAATIADALRNVLD
CCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHC
DPTYRATAGRLRQQFTAAGGTATAAAHIEQLAS
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]