| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315438
Identifier: 158315438
GI number: 158315438
Start: 4316463
End: 4316927
Strand: Reverse
Name: 158315438
Synonym: Franean1_3642
Alternate gene names: NA
Gene position: 4316927-4316463 (Counterclockwise)
Preceding gene: 158315439
Following gene: 158315437
Centisome position: 48.06
GC content: 64.95
Gene sequence:
>465_bases ATGGTGAGAGGGTCGAACGGCGACCTCGGGAAAGGGAGATCGACGATGGCGAAGTACATGCTGATCATGCGTGGCACGGA CGAGTCCCTCGCGAAGATGATGGACACGCCTTTCGAGGAGATGCTCGAGGTCGTGGGCCGCTTCAACGAGGAGTTGATCC GGGCTGGTGTGCTCGTCTCCGCCGAGGGGCTGGACGACCCGTCCCAGGGCGTGGTGGTCGACTACAGCAGTGAGACGCCG GTGGTCACCGACGGTCCGTACGGTGAGACCAAGGAGCTGTTCGGCGGCTTTTACATCATCGAGGTCGCCTCGAAGGAGGA GGCCGTCGAGTGGGCGAAGCGGATGCCCGCGATCAACGGTTCGAAGTGCGAGATCCGCCGCGTGCCGGGCATCGACGAGT TCCCGCAGGACAACGAGTGGGTCGTCAGGGAGCGGGCGTGGCGCGAGCGGACCGGCCAGCTCTGA
Upstream 100 bases:
>100_bases GCCTCTGATCAGGTTCACGCAGGACGACGGCGCCGGTCCACAGGAGGCCACGAAAAATGCCGGCAGGCCGTGTCGATCCG CGGCGGGGCCGTTCGACCTG
Downstream 100 bases:
>100_bases TGCCCGCGGGCACCGGCGGCCCGCCGAGCGCCGAGCCGGCGCGGCGGGCCGTCGAGGCCGTCTGGCGGATCGAGTCCGCC CGGATCGTCGGCGCACTCGC
Product: DGPFAETKE family protein
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Like Protein; DGPF Domain-Containing Protein; YCII-Related; Dgpfaetke; DGPFAETKE Domain-Containing Protein; DGPF Domain-Containing; Dgpfaetke Family Protein; DGPF Protein; Histidine Kinase; DGPF Domain Family; DGPF Domain Protein; Dgpfaetke Domain; Dgpf Family Protein; Transcription Regulation Protein; Dgpfaetke Domain-Containing Protein; Glutathione S-Transferase
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVRGSNGDLGKGRSTMAKYMLIMRGTDESLAKMMDTPFEEMLEVVGRFNEELIRAGVLVSAEGLDDPSQGVVVDYSSETP VVTDGPYGETKELFGGFYIIEVASKEEAVEWAKRMPAINGSKCEIRRVPGIDEFPQDNEWVVRERAWRERTGQL
Sequences:
>Translated_154_residues MVRGSNGDLGKGRSTMAKYMLIMRGTDESLAKMMDTPFEEMLEVVGRFNEELIRAGVLVSAEGLDDPSQGVVVDYSSETP VVTDGPYGETKELFGGFYIIEVASKEEAVEWAKRMPAINGSKCEIRRVPGIDEFPQDNEWVVRERAWRERTGQL >Mature_154_residues MVRGSNGDLGKGRSTMAKYMLIMRGTDESLAKMMDTPFEEMLEVVGRFNEELIRAGVLVSAEGLDDPSQGVVVDYSSETP VVTDGPYGETKELFGGFYIIEVASKEEAVEWAKRMPAINGSKCEIRRVPGIDEFPQDNEWVVRERAWRERTGQL
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17241; Mature: 17241
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRGSNGDLGKGRSTMAKYMLIMRGTDESLAKMMDTPFEEMLEVVGRFNEELIRAGVLVS CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE AEGLDDPSQGVVVDYSSETPVVTDGPYGETKELFGGFYIIEVASKEEAVEWAKRMPAING ECCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHCCEEEEEECCHHHHHHHHHHCCCCCC SKCEIRRVPGIDEFPQDNEWVVRERAWRERTGQL CCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MVRGSNGDLGKGRSTMAKYMLIMRGTDESLAKMMDTPFEEMLEVVGRFNEELIRAGVLVS CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE AEGLDDPSQGVVVDYSSETPVVTDGPYGETKELFGGFYIIEVASKEEAVEWAKRMPAING ECCCCCCCCCEEEEECCCCCEEECCCCCCHHHHHCCEEEEEECCHHHHHHHHHHCCCCCC SKCEIRRVPGIDEFPQDNEWVVRERAWRERTGQL CCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA