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The map label for this gene is 158315437

Identifier: 158315437

GI number: 158315437

Start: 4315159

End: 4316463

Strand: Reverse

Name: 158315437

Synonym: Franean1_3641

Alternate gene names: NA

Gene position: 4316463-4315159 (Counterclockwise)

Preceding gene: 158315438

Following gene: 158315434

Centisome position: 48.06

GC content: 76.48

Gene sequence:

>1305_bases
ATGCCCGCGGGCACCGGCGGCCCGCCGAGCGCCGAGCCGGCGCGGCGGGCCGTCGAGGCCGTCTGGCGGATCGAGTCCGC
CCGGATCGTCGGCGCACTCGCCCGCTACACCGGCGACTTCGCGCTTGCCGAGGACGTCGCCCAGGAGGCGGTGGCCGAGG
CGCTCGTCTCCTGGTCACGGGACGGCGAGCCGGCGAACCCGGTGGGCTGGCTCCTGACGACCGCGCGGCGGCGCGCCGTC
GACAGCTTCCGCCGCCGGGCGGCGCTCGACGAGCGGTACGCCATGGTCGCCGGGCAGCTCGCCGAGGGTGAGGCCGTCTC
GGGCGGCCTGGCCCCGGCGGCCCGGCCGGACGATCTGCCGTGGGACCCCGACCGGATCGACGACGACATCCTGGCGCTGA
TGTTCGTGGCGTGTCATCCGGTGCTGTCGGCCGAGGCCCGGGTGGCGCTGACCCTGCGAGCGGTCGGCGGGCTGTCCAGC
GAGGAGATCGCCCGGGCGTTCCTGGTGCCCGTGCCGACGGTCCAGGCGCGGATCACGCGGGCGAAGAAGACCCTCGCCGC
GGCCCGGGTGGCGTTCGAGCTGCCACCGGCGACGGAACGGCGCGGGCGGCTCTCCGACGTCCTGAGTGTGCTTTACGTGA
TCTTCACCGAGGGTTCGACGGCGACGTCCGGTGACGACCTGCTGCGGCCCGATCTGGCCTACGAGGCGATCCGGCTGGGA
CGGACGCTGGCCGCGCTGTTGCCCGACGAGCCGGAGGTACACGGGCTGCTCGCCCTGTGCGAGCTGACGGCCGCGCGCTT
CGCGGCGCGCACCGGGCCCGACGGCGAGGCGGTGCTCCTGGAGGACCAGGACCGGCGGCGGTGGGACAGGTCGGCGATCC
GTCGCGGCATGGCCGCGCTCGGCCGGGCCGCGGCGCTCGGGCGCGGCCTCGGGCCGTACGGCCTGCAGGCGGCGATCGCC
GCCTGCCACGCGTCGGCGCCCTCGGTGGCGGAGACCGACTGGGAGCGGATCGTGCTCCTCTACGAGGCGCTCGGCCGGGT
GGCTCCCTCCCCCGTCGTCGAGCTCAACCGCGCCGTCGCCGTGGCGATGGCGGCCGGGCCGCGGGAGGCGCTGTCCATCG
TGGACGATCTCGTCGCCGCCGGCCGGTTGTCGGGCTCGCACCTGCTCCCGAGCGTGCGCGGCGAGCTGCTCTCCCGGCTC
GGCCGGACGTCCGAGGCCCGGGCCGAGCTGGAACTCGCCGCGCGGCTGTGCCGCAACGTCCGCGAGCGTTCGGTGCTCCT
GCGCAAGGCAGCCGCGCTGGCGTGA

Upstream 100 bases:

>100_bases
AGTGCGAGATCCGCCGCGTGCCGGGCATCGACGAGTTCCCGCAGGACAACGAGTGGGTCGTCAGGGAGCGGGCGTGGCGC
GAGCGGACCGGCCAGCTCTG

Downstream 100 bases:

>100_bases
CGCCCTCGCCGGGTTCAGCGCCGGATCGCCGGGATCACCACCAGATCGCCGGAATCACCACCGGTCGCGGTGCAGGACGG
TCTCCAACGGCTCCCGCGCG

Product: RNA polymerase ECF-subfamily sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MPAGTGGPPSAEPARRAVEAVWRIESARIVGALARYTGDFALAEDVAQEAVAEALVSWSRDGEPANPVGWLLTTARRRAV
DSFRRRAALDERYAMVAGQLAEGEAVSGGLAPAARPDDLPWDPDRIDDDILALMFVACHPVLSAEARVALTLRAVGGLSS
EEIARAFLVPVPTVQARITRAKKTLAAARVAFELPPATERRGRLSDVLSVLYVIFTEGSTATSGDDLLRPDLAYEAIRLG
RTLAALLPDEPEVHGLLALCELTAARFAARTGPDGEAVLLEDQDRRRWDRSAIRRGMAALGRAAALGRGLGPYGLQAAIA
ACHASAPSVAETDWERIVLLYEALGRVAPSPVVELNRAVAVAMAAGPREALSIVDDLVAAGRLSGSHLLPSVRGELLSRL
GRTSEARAELELAARLCRNVRERSVLLRKAAALA

Sequences:

>Translated_434_residues
MPAGTGGPPSAEPARRAVEAVWRIESARIVGALARYTGDFALAEDVAQEAVAEALVSWSRDGEPANPVGWLLTTARRRAV
DSFRRRAALDERYAMVAGQLAEGEAVSGGLAPAARPDDLPWDPDRIDDDILALMFVACHPVLSAEARVALTLRAVGGLSS
EEIARAFLVPVPTVQARITRAKKTLAAARVAFELPPATERRGRLSDVLSVLYVIFTEGSTATSGDDLLRPDLAYEAIRLG
RTLAALLPDEPEVHGLLALCELTAARFAARTGPDGEAVLLEDQDRRRWDRSAIRRGMAALGRAAALGRGLGPYGLQAAIA
ACHASAPSVAETDWERIVLLYEALGRVAPSPVVELNRAVAVAMAAGPREALSIVDDLVAAGRLSGSHLLPSVRGELLSRL
GRTSEARAELELAARLCRNVRERSVLLRKAAALA
>Mature_433_residues
PAGTGGPPSAEPARRAVEAVWRIESARIVGALARYTGDFALAEDVAQEAVAEALVSWSRDGEPANPVGWLLTTARRRAVD
SFRRRAALDERYAMVAGQLAEGEAVSGGLAPAARPDDLPWDPDRIDDDILALMFVACHPVLSAEARVALTLRAVGGLSSE
EIARAFLVPVPTVQARITRAKKTLAAARVAFELPPATERRGRLSDVLSVLYVIFTEGSTATSGDDLLRPDLAYEAIRLGR
TLAALLPDEPEVHGLLALCELTAARFAARTGPDGEAVLLEDQDRRRWDRSAIRRGMAALGRAAALGRGLGPYGLQAAIAA
CHASAPSVAETDWERIVLLYEALGRVAPSPVVELNRAVAVAMAAGPREALSIVDDLVAAGRLSGSHLLPSVRGELLSRLG
RTSEARAELELAARLCRNVRERSVLLRKAAALA

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 46115; Mature: 45984

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGTGGPPSAEPARRAVEAVWRIESARIVGALARYTGDFALAEDVAQEAVAEALVSWSR
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
DGEPANPVGWLLTTARRRAVDSFRRRAALDERYAMVAGQLAEGEAVSGGLAPAARPDDLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
WDPDRIDDDILALMFVACHPVLSAEARVALTLRAVGGLSSEEIARAFLVPVPTVQARITR
CCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEHHHCCCCHHHHHHHHHCCCCHHHHHHHH
AKKTLAAARVAFELPPATERRGRLSDVLSVLYVIFTEGSTATSGDDLLRPDLAYEAIRLG
HHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHH
RTLAALLPDEPEVHGLLALCELTAARFAARTGPDGEAVLLEDQDRRRWDRSAIRRGMAAL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
GRAAALGRGLGPYGLQAAIAACHASAPSVAETDWERIVLLYEALGRVAPSPVVELNRAVA
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VAMAAGPREALSIVDDLVAAGRLSGSHLLPSVRGELLSRLGRTSEARAELELAARLCRNV
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RERSVLLRKAAALA
HHHHHHHHHHHHCC
>Mature Secondary Structure 
PAGTGGPPSAEPARRAVEAVWRIESARIVGALARYTGDFALAEDVAQEAVAEALVSWSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
DGEPANPVGWLLTTARRRAVDSFRRRAALDERYAMVAGQLAEGEAVSGGLAPAARPDDLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
WDPDRIDDDILALMFVACHPVLSAEARVALTLRAVGGLSSEEIARAFLVPVPTVQARITR
CCCCCCCHHHHHHHHHHHHHHHCCCCHHEEEEHHHCCCCHHHHHHHHHCCCCHHHHHHHH
AKKTLAAARVAFELPPATERRGRLSDVLSVLYVIFTEGSTATSGDDLLRPDLAYEAIRLG
HHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHH
RTLAALLPDEPEVHGLLALCELTAARFAARTGPDGEAVLLEDQDRRRWDRSAIRRGMAAL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
GRAAALGRGLGPYGLQAAIAACHASAPSVAETDWERIVLLYEALGRVAPSPVVELNRAVA
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VAMAAGPREALSIVDDLVAAGRLSGSHLLPSVRGELLSRLGRTSEARAELELAARLCRNV
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RERSVLLRKAAALA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]