Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315421

Identifier: 158315421

GI number: 158315421

Start: 4295874

End: 4297013

Strand: Reverse

Name: 158315421

Synonym: Franean1_3625

Alternate gene names: NA

Gene position: 4297013-4295874 (Counterclockwise)

Preceding gene: 158315422

Following gene: 158315420

Centisome position: 47.84

GC content: 67.02

Gene sequence:

>1140_bases
GTGTGCGCCGCCGCGCTCCTATGCGGGCTAACCGCGTGCGCCGACTCGGACGACCAGTCGGCCGCGCCGGCCCCAACCGG
AACCGGAGCGGTGGGCGCATCCCGGTACAGCACTCCGCTGAAGGGGAGCTGCCCGGATACCGTCATCGTCCAACAACCAT
GGTGGCCCGGCGCCGACCAGGGGTTCCTCTTCCAGCTCCTGGGGCCGAACCCCACCATCGACAAGGACTCCAGCCGCATC
ACCGGCCAGCTCGGCGGAACCGGTGTGACGCTTGAGATCCGGGCCGGCGGCCCGGCGGTCGGCTTCCAGCCGGCGTCCTC
GCTCCTCGCCCAGGACGACGACATCCTGCTCGGCGACATCAGCACGGACGAGGCGGTCCAGAACTCGGCCAAGGCACCGA
CGGTGGCGGTCTTCTCAGTGTACGAGAAGAACCCGCAGGTCCTCCTGTGGGGAAATCCGGACTGGAACTTCACCAACGTC
GCCGACATCGGCCGGGAAGGCGCGACGGTGCTGGTCTCCGCGAGCCAGGTCTCCTACCCCGAGGTGTTCGAGCGGGAAGG
CCTGCTGAACGAGTCGCAGATCGACACCTCCTACCAGGGCAGTCCGGACCGCTTCGTCGCGGCCGACGGTAAGATCGTGC
AGCAGGGGTTCGTGACCTATGAGCCCTACCAGCTCGAGCATGACGTCAAGGCGTGGAACAAGCCCGTCAAGTATCTGCTC
CTCGACAAGGACTACCCGGTCTACCGGTCGCAGCTTTCCATCCGGCCGGACAAGCTCGCGGCCAACCGCGACTGCCTCAG
CAAGCTCGTGCCACTGTTCCAGCAGGCGCAGCGTGACTACATCAACGATCCCGAGGCGACCAACCAGCTCCTGCTCAAGG
TCCTCGACTCGCTGAACACCAGCGGGTTCACCCTCTCCCCCGAGCTGCTCGCGAACGCCAACGCCCAGCAGAAGAGCCTC
GGCCTGATCGCCGACGGCAGTGACGGCGTCCTGGGCAGCTTCGACACCGCCCGCGTCCAGACCCTGATCGGCCGCCTCAC
CCCGGTCTTCGAGGCCAAGGGCGACAAGCTGAAGCCGGGCCTCGCCCCGAAGGACCTGGTCACCAACGAGTTCCTCGACC
GGTCGATCTCCCTGAAGTAG

Upstream 100 bases:

>100_bases
ACGGGTGGGTCGGTCCCGTCACGGCGGCGATTTCGCGGGTCTGGAAACATCCTTCCCCGTGCGAGTTTCAGGATTCCGTC
GCCGTTCCGTGACCACGAGC

Downstream 100 bases:

>100_bases
CCGAGAAGCAGCCAACCAGGAATCCACGGTGGTCCCGAACCAGGGTTCGGGACCACCGTGGATTCCGCCCGCCGACGCCC
GCGACCACCGCGCAGGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MCAAALLCGLTACADSDDQSAAPAPTGTGAVGASRYSTPLKGSCPDTVIVQQPWWPGADQGFLFQLLGPNPTIDKDSSRI
TGQLGGTGVTLEIRAGGPAVGFQPASSLLAQDDDILLGDISTDEAVQNSAKAPTVAVFSVYEKNPQVLLWGNPDWNFTNV
ADIGREGATVLVSASQVSYPEVFEREGLLNESQIDTSYQGSPDRFVAADGKIVQQGFVTYEPYQLEHDVKAWNKPVKYLL
LDKDYPVYRSQLSIRPDKLAANRDCLSKLVPLFQQAQRDYINDPEATNQLLLKVLDSLNTSGFTLSPELLANANAQQKSL
GLIADGSDGVLGSFDTARVQTLIGRLTPVFEAKGDKLKPGLAPKDLVTNEFLDRSISLK

Sequences:

>Translated_379_residues
MCAAALLCGLTACADSDDQSAAPAPTGTGAVGASRYSTPLKGSCPDTVIVQQPWWPGADQGFLFQLLGPNPTIDKDSSRI
TGQLGGTGVTLEIRAGGPAVGFQPASSLLAQDDDILLGDISTDEAVQNSAKAPTVAVFSVYEKNPQVLLWGNPDWNFTNV
ADIGREGATVLVSASQVSYPEVFEREGLLNESQIDTSYQGSPDRFVAADGKIVQQGFVTYEPYQLEHDVKAWNKPVKYLL
LDKDYPVYRSQLSIRPDKLAANRDCLSKLVPLFQQAQRDYINDPEATNQLLLKVLDSLNTSGFTLSPELLANANAQQKSL
GLIADGSDGVLGSFDTARVQTLIGRLTPVFEAKGDKLKPGLAPKDLVTNEFLDRSISLK
>Mature_379_residues
MCAAALLCGLTACADSDDQSAAPAPTGTGAVGASRYSTPLKGSCPDTVIVQQPWWPGADQGFLFQLLGPNPTIDKDSSRI
TGQLGGTGVTLEIRAGGPAVGFQPASSLLAQDDDILLGDISTDEAVQNSAKAPTVAVFSVYEKNPQVLLWGNPDWNFTNV
ADIGREGATVLVSASQVSYPEVFEREGLLNESQIDTSYQGSPDRFVAADGKIVQQGFVTYEPYQLEHDVKAWNKPVKYLL
LDKDYPVYRSQLSIRPDKLAANRDCLSKLVPLFQQAQRDYINDPEATNQLLLKVLDSLNTSGFTLSPELLANANAQQKSL
GLIADGSDGVLGSFDTARVQTLIGRLTPVFEAKGDKLKPGLAPKDLVTNEFLDRSISLK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40636; Mature: 40636

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAAALLCGLTACADSDDQSAAPAPTGTGAVGASRYSTPLKGSCPDTVIVQQPWWPGADQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
GFLFQLLGPNPTIDKDSSRITGQLGGTGVTLEIRAGGPAVGFQPASSLLAQDDDILLGDI
CEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHCCCCCEEEECC
STDEAVQNSAKAPTVAVFSVYEKNPQVLLWGNPDWNFTNVADIGREGATVLVSASQVSYP
CCHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCH
EVFEREGLLNESQIDTSYQGSPDRFVAADGKIVQQGFVTYEPYQLEHDVKAWNKPVKYLL
HHHHHCCCCCCHHCCCCCCCCCCCEEECCCCEEECCCEEECCEECCCHHHHHCCCEEEEE
LDKDYPVYRSQLSIRPDKLAANRDCLSKLVPLFQQAQRDYINDPEATNQLLLKVLDSLNT
ECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
SGFTLSPELLANANAQQKSLGLIADGSDGVLGSFDTARVQTLIGRLTPVFEAKGDKLKPG
CCEEECHHHHHCCCCCHHCCEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCC
LAPKDLVTNEFLDRSISLK
CCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MCAAALLCGLTACADSDDQSAAPAPTGTGAVGASRYSTPLKGSCPDTVIVQQPWWPGADQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
GFLFQLLGPNPTIDKDSSRITGQLGGTGVTLEIRAGGPAVGFQPASSLLAQDDDILLGDI
CEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHHCCCCCEEEECC
STDEAVQNSAKAPTVAVFSVYEKNPQVLLWGNPDWNFTNVADIGREGATVLVSASQVSYP
CCHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCCCHHHCCCCCCEEEEEECCCCCH
EVFEREGLLNESQIDTSYQGSPDRFVAADGKIVQQGFVTYEPYQLEHDVKAWNKPVKYLL
HHHHHCCCCCCHHCCCCCCCCCCCEEECCCCEEECCCEEECCEECCCHHHHHCCCEEEEE
LDKDYPVYRSQLSIRPDKLAANRDCLSKLVPLFQQAQRDYINDPEATNQLLLKVLDSLNT
ECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
SGFTLSPELLANANAQQKSLGLIADGSDGVLGSFDTARVQTLIGRLTPVFEAKGDKLKPG
CCEEECHHHHHCCCCCHHCCEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCC
LAPKDLVTNEFLDRSISLK
CCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA