Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315420

Identifier: 158315420

GI number: 158315420

Start: 4294976

End: 4295767

Strand: Reverse

Name: 158315420

Synonym: Franean1_3624

Alternate gene names: NA

Gene position: 4295767-4294976 (Counterclockwise)

Preceding gene: 158315421

Following gene: 158315419

Centisome position: 47.83

GC content: 69.57

Gene sequence:

>792_bases
GTGAACAGCCCCACCGACGACCACCCGCCAGCCACGTTCGACACCAGCAGGCCACAGTCGGCCCGGGTCTGGAACTACTG
GCTGGGCGGCAAGGACTACTTCGAGGTCGACAGCGAGTACGGAGACCGCTACGTCGAGCTGTACCCGGACATCGTCGAGA
TCGCCCGGGCCTCCCGGGCCTTCCTCGGCCGTGCGGTCCGCCACCTGACCGGCGACGTGGGCATCCGGCAGTTCCTCGAC
ATCGGCACCGGCCTGCCCGTCACCGGAAACACCCATGAGGTCGCCCAGTCGGTCGACCCGCGGTCCCGCGTCGTGTACGT
CGACAACGACCCGCTGGTGCTGGCGCACGCCCGCGCCCTGCTGACGGGCAGCCCCGAAGGGGCCACCGCCTACCTCGACG
CCGACGTGAACGACCCCGAGACCATCCTGGCGGGCGCGGCCGAGACCCTGGACTTCAGCCGCCCGATCGGGCTCATCCTC
ATGGGGATCATGGGGAATGTGGTCGACCTCGACGAGGCATACGCGATCGTGCGGCGGTTTCTCGATGCCGTGCCGTCGGG
AAGCCACCTCGTGCTCGGTGACGGCACCGTCGCCGACGGAAAGGTCCACGCCCTCAGCGAGGGGTCCGGCGGGCACGGGT
ACTACAATCGGACGCCCCAGGAGATCGCCCGGTATTTCGACGGTCTCGAGCTGCTCGAGCCCGGCCTGATTTCGACCCCG
TTCTGGCGACCCGCCCCGGGCACCACCCCCACTGCGCTGGACTCGTTCTGCGGTGTCGCGCGCAAGGCGTGA

Upstream 100 bases:

>100_bases
AGCAGCCAACCAGGAATCCACGGTGGTCCCGAACCAGGGTTCGGGACCACCGTGGATTCCGCCCGCCGACGCCCGCGACC
ACCGCGCAGGGAGCCGCCCC

Downstream 100 bases:

>100_bases
GCGCCATCAAAGAAGGGGAGACATTCTCGGACGCTGATCACTTACGGGGGACAGGATGGTAGACCAGCGGAACCGCGGGC
CGGTCGCGCTGCGGATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNSPTDDHPPATFDTSRPQSARVWNYWLGGKDYFEVDSEYGDRYVELYPDIVEIARASRAFLGRAVRHLTGDVGIRQFLD
IGTGLPVTGNTHEVAQSVDPRSRVVYVDNDPLVLAHARALLTGSPEGATAYLDADVNDPETILAGAAETLDFSRPIGLIL
MGIMGNVVDLDEAYAIVRRFLDAVPSGSHLVLGDGTVADGKVHALSEGSGGHGYYNRTPQEIARYFDGLELLEPGLISTP
FWRPAPGTTPTALDSFCGVARKA

Sequences:

>Translated_263_residues
MNSPTDDHPPATFDTSRPQSARVWNYWLGGKDYFEVDSEYGDRYVELYPDIVEIARASRAFLGRAVRHLTGDVGIRQFLD
IGTGLPVTGNTHEVAQSVDPRSRVVYVDNDPLVLAHARALLTGSPEGATAYLDADVNDPETILAGAAETLDFSRPIGLIL
MGIMGNVVDLDEAYAIVRRFLDAVPSGSHLVLGDGTVADGKVHALSEGSGGHGYYNRTPQEIARYFDGLELLEPGLISTP
FWRPAPGTTPTALDSFCGVARKA
>Mature_263_residues
MNSPTDDHPPATFDTSRPQSARVWNYWLGGKDYFEVDSEYGDRYVELYPDIVEIARASRAFLGRAVRHLTGDVGIRQFLD
IGTGLPVTGNTHEVAQSVDPRSRVVYVDNDPLVLAHARALLTGSPEGATAYLDADVNDPETILAGAAETLDFSRPIGLIL
MGIMGNVVDLDEAYAIVRRFLDAVPSGSHLVLGDGTVADGKVHALSEGSGGHGYYNRTPQEIARYFDGLELLEPGLISTP
FWRPAPGTTPTALDSFCGVARKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28402; Mature: 28402

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPTDDHPPATFDTSRPQSARVWNYWLGGKDYFEVDSEYGDRYVELYPDIVEIARASRA
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCHHHCCEEEHHHHHHHHHHHHHHH
FLGRAVRHLTGDVGIRQFLDIGTGLPVTGNTHEVAQSVDPRSRVVYVDNDPLVLAHARAL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEEHHHH
LTGSPEGATAYLDADVNDPETILAGAAETLDFSRPIGLILMGIMGNVVDLDEAYAIVRRF
HCCCCCCCEEEEECCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
LDAVPSGSHLVLGDGTVADGKVHALSEGSGGHGYYNRTPQEIARYFDGLELLEPGLISTP
HHHCCCCCEEEEECCEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCC
FWRPAPGTTPTALDSFCGVARKA
CCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSPTDDHPPATFDTSRPQSARVWNYWLGGKDYFEVDSEYGDRYVELYPDIVEIARASRA
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCHHHCCEEEHHHHHHHHHHHHHHH
FLGRAVRHLTGDVGIRQFLDIGTGLPVTGNTHEVAQSVDPRSRVVYVDNDPLVLAHARAL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEECCCCEEEEEHHHH
LTGSPEGATAYLDADVNDPETILAGAAETLDFSRPIGLILMGIMGNVVDLDEAYAIVRRF
HCCCCCCCEEEEECCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
LDAVPSGSHLVLGDGTVADGKVHALSEGSGGHGYYNRTPQEIARYFDGLELLEPGLISTP
HHHCCCCCEEEEECCEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCCC
FWRPAPGTTPTALDSFCGVARKA
CCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA