Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315375

Identifier: 158315375

GI number: 158315375

Start: 4238181

End: 4238555

Strand: Reverse

Name: 158315375

Synonym: Franean1_3577

Alternate gene names: NA

Gene position: 4238555-4238181 (Counterclockwise)

Preceding gene: 158315378

Following gene: 158315374

Centisome position: 47.19

GC content: 62.4

Gene sequence:

>375_bases
GTGACAGCCCAACCGGGCGGCGATGGCACTGGTCCGTTCGCCGTCCCAGCTAGCCACGATCATCTTCGCCCGCATGGTCC
AGTCACCGGGAGCATGCCGCGCCCCGGCCAGCTTCCGGACCTCCTCCGCGTCCGCGGGAGAGCGGGCATACAACAACTTC
GGCATGAAAGACCGCCTCCCGACCAGCATCCCACCGGCGGAAAAACGATCTACAGCCGCAATGAGGAACGTTGCATTAGC
CAGGTCAGACGCCGACTACGCAACGCGGTGGACCTAACGCACCACAATAAGAACCAGATGATCTTGGTTCAGGGCCCTGA
AATCACCATCCGTCCGGTCGCCGCACGACTGCTGACCAGGTGCGATGCAGAATGA

Upstream 100 bases:

>100_bases
CGCTTTGACCGCGGCAAGTTTCCGCCGCCGGTGAGCAACCCACATTCGCTGCTCGGCGACGGGGCCATCCTCGCGGTGCA
ATGGCCAGCCCTGCCCGCAT

Downstream 100 bases:

>100_bases
GGGCCGAAACTGGGACATCATCCAATGGTTCGAACGAATGTTCCGCAGACCTGGCGGTTCCTGAGAGCACGGTCACACTC
GTGACCGTCATCGTAGGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPPDQHPTGGKTIYSRNEERCIS
QVRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTRCDAE

Sequences:

>Translated_124_residues
MTAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPPDQHPTGGKTIYSRNEERCIS
QVRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTRCDAE
>Mature_123_residues
TAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPPDQHPTGGKTIYSRNEERCISQ
VRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTRCDAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13736; Mature: 13605

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
DQHPTGGKTIYSRNEERCISQVRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTR
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHH
CDAE
CCCC
>Mature Secondary Structure 
TAQPGGDGTGPFAVPASHDHLRPHGPVTGSMPRPGQLPDLLRVRGRAGIQQLRHERPPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
DQHPTGGKTIYSRNEERCISQVRRRLRNAVDLTHHNKNQMILVQGPEITIRPVAARLLTR
CCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHH
CDAE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA