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The map label for this gene is ydfG [C]

Identifier: 158315370

GI number: 158315370

Start: 4234233

End: 4235159

Strand: Direct

Name: ydfG [C]

Synonym: Franean1_3572

Alternate gene names: 158315370

Gene position: 4234233-4235159 (Clockwise)

Preceding gene: 158315369

Following gene: 158315371

Centisome position: 47.14

GC content: 71.09

Gene sequence:

>927_bases
ATGCAGAACACCATTGATCTGACCGGACGACTCGCCGTGGTGACCGGAGCGAGCAGCGGCCTTGGATTGGGTCTGGCGAC
CCGCCTGGCCGCGGCCGGCGCCAAGGTTCTCCTGCCGGTCCGCGATGAGGCCAAGGGCGAGGCCGCACTGAGCCACATCC
GCGCCGAAGCGCCCGGTGCGGACGTGTCGCTCCGCGAACTCGACCTGGCCTCGCTGAAGTCGGTGGAGGCCCTGGGCGAC
ACCCTGAACGCCGAGGGCCGGCCGATCCACATTCTGATCAACAACGCCGGGCTGATGACGCCTGCCACGCGGCACACCAC
CGCCGACGGCCTGGAACTGCAGTTCGGGACCAACCACATCGGGCACTTCGCGCTCACCGGCTGGCTGCTGCCGCTGCTGA
ACGCCGGCCACGCCCGGGTGACCACGATGACCAGCAGCGCGGCCCGGCACGCCAAGCTCAACTGGGAAGACCTGCAGAGC
GACCAGGCGTACGCGCCGATCCGCGCCTACAACCAGTCGAAGCTGGCGAACCTGCTGTTCGCACTCGAACTCGACCGGCG
CTCCCGGGCCGGGGGCTGGGGGATCGTCAGCAACGCCGCACACCCCGGCACCACCCTGACCGGCCTGTACGCCGCCGGAC
CCAACCTGGGCCGGGAGAAATCCTCGCCGATCGAGGCCGCCATGAAGCGCCTGGCCCGCTGGGGCGTCCTGGTCCAGGGC
GTCGACCGGGGCCTGCTCCCGGCCCTGTACGCGGCCACCAGTCCGGACGCCGAGGGCGGCCACTTCTACGGTCCGGACGG
CTTCGGCCAGTTCACCGGCGGTCCGGCCGAGCTGGAGATCTACCGCCCGGCACGCGACGAGGACGCGGCCACCAGGCTGT
GGGACGTCTCGCAACGTCTCGCCGGCGTCGAGTTCGCGGCGGTGTGA

Upstream 100 bases:

>100_bases
CGCCAAGCTGCGGGGCTGGCACCGCGGCTGAGCCTTGTACTGACAGGACATGGTTCCGGACGCCGAGTGGCGTCAGCGTT
GAGGCATGAAGAAGGTAACC

Downstream 100 bases:

>100_bases
GCATGGACCGCGCCCGGCTGGCCGAATACCTGCGTACCCGTCGTGAAGCCCTGCAACCGGAGGACGTCGGCCTGCCCCGC
GGGCGGCGCAGGCGCACCCA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MQNTIDLTGRLAVVTGASSGLGLGLATRLAAAGAKVLLPVRDEAKGEAALSHIRAEAPGADVSLRELDLASLKSVEALGD
TLNAEGRPIHILINNAGLMTPATRHTTADGLELQFGTNHIGHFALTGWLLPLLNAGHARVTTMTSSAARHAKLNWEDLQS
DQAYAPIRAYNQSKLANLLFALELDRRSRAGGWGIVSNAAHPGTTLTGLYAAGPNLGREKSSPIEAAMKRLARWGVLVQG
VDRGLLPALYAATSPDAEGGHFYGPDGFGQFTGGPAELEIYRPARDEDAATRLWDVSQRLAGVEFAAV

Sequences:

>Translated_308_residues
MQNTIDLTGRLAVVTGASSGLGLGLATRLAAAGAKVLLPVRDEAKGEAALSHIRAEAPGADVSLRELDLASLKSVEALGD
TLNAEGRPIHILINNAGLMTPATRHTTADGLELQFGTNHIGHFALTGWLLPLLNAGHARVTTMTSSAARHAKLNWEDLQS
DQAYAPIRAYNQSKLANLLFALELDRRSRAGGWGIVSNAAHPGTTLTGLYAAGPNLGREKSSPIEAAMKRLARWGVLVQG
VDRGLLPALYAATSPDAEGGHFYGPDGFGQFTGGPAELEIYRPARDEDAATRLWDVSQRLAGVEFAAV
>Mature_308_residues
MQNTIDLTGRLAVVTGASSGLGLGLATRLAAAGAKVLLPVRDEAKGEAALSHIRAEAPGADVSLRELDLASLKSVEALGD
TLNAEGRPIHILINNAGLMTPATRHTTADGLELQFGTNHIGHFALTGWLLPLLNAGHARVTTMTSSAARHAKLNWEDLQS
DQAYAPIRAYNQSKLANLLFALELDRRSRAGGWGIVSNAAHPGTTLTGLYAAGPNLGREKSSPIEAAMKRLARWGVLVQG
VDRGLLPALYAATSPDAEGGHFYGPDGFGQFTGGPAELEIYRPARDEDAATRLWDVSQRLAGVEFAAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI10190746, Length=312, Percent_Identity=35.8974358974359, Blast_Score=161, Evalue=7e-40,
Organism=Homo sapiens, GI186928839, Length=307, Percent_Identity=35.5048859934853, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI225579078, Length=307, Percent_Identity=37.4592833876222, Blast_Score=144, Evalue=8e-35,
Organism=Homo sapiens, GI166795268, Length=308, Percent_Identity=34.4155844155844, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI193804850, Length=299, Percent_Identity=33.7792642140468, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI7706523, Length=307, Percent_Identity=33.8762214983713, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI19923931, Length=269, Percent_Identity=37.546468401487, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI146231950, Length=305, Percent_Identity=36.3934426229508, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI7705421, Length=233, Percent_Identity=30.4721030042918, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI4502601, Length=156, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI13375997, Length=150, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI72534732, Length=150, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193207620, Length=312, Percent_Identity=28.2051282051282, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17532805, Length=315, Percent_Identity=27.6190476190476, Blast_Score=110, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI71992402, Length=210, Percent_Identity=33.8095238095238, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17532791, Length=210, Percent_Identity=32.8571428571429, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI32565532, Length=218, Percent_Identity=33.0275229357798, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17558006, Length=206, Percent_Identity=33.0097087378641, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17505416, Length=230, Percent_Identity=32.1739130434783, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17535059, Length=316, Percent_Identity=28.1645569620253, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI72001364, Length=310, Percent_Identity=29.0322580645161, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324820, Length=321, Percent_Identity=28.0373831775701, Blast_Score=79, Evalue=9e-16,
Organism=Drosophila melanogaster, GI28573296, Length=297, Percent_Identity=35.016835016835, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI22024069, Length=301, Percent_Identity=35.2159468438538, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI161076371, Length=299, Percent_Identity=34.7826086956522, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI19921754, Length=304, Percent_Identity=33.5526315789474, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI24586328, Length=293, Percent_Identity=34.8122866894198, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI45554248, Length=216, Percent_Identity=39.8148148148148, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24640117, Length=216, Percent_Identity=39.8148148148148, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI20129347, Length=212, Percent_Identity=36.3207547169811, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24656154, Length=302, Percent_Identity=31.4569536423841, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI19922628, Length=302, Percent_Identity=31.4569536423841, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24647946, Length=297, Percent_Identity=27.9461279461279, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI45553409, Length=297, Percent_Identity=27.9461279461279, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24647948, Length=297, Percent_Identity=27.9461279461279, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24647931, Length=222, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 32437; Mature: 32437

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNTIDLTGRLAVVTGASSGLGLGLATRLAAAGAKVLLPVRDEAKGEAALSHIRAEAPGA
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCC
DVSLRELDLASLKSVEALGDTLNAEGRPIHILINNAGLMTPATRHTTADGLELQFGTNHI
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCC
GHFALTGWLLPLLNAGHARVTTMTSSAARHAKLNWEDLQSDQAYAPIRAYNQSKLANLLF
HHHHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCHHHHCCCCCCCCHHHCCHHHHHHHHH
ALELDRRSRAGGWGIVSNAAHPGTTLTGLYAAGPNLGREKSSPIEAAMKRLARWGVLVQG
EEEECCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEC
VDRGLLPALYAATSPDAEGGHFYGPDGFGQFTGGPAELEIYRPARDEDAATRLWDVSQRL
CCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
AGVEFAAV
CCCEEECC
>Mature Secondary Structure
MQNTIDLTGRLAVVTGASSGLGLGLATRLAAAGAKVLLPVRDEAKGEAALSHIRAEAPGA
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCC
DVSLRELDLASLKSVEALGDTLNAEGRPIHILINNAGLMTPATRHTTADGLELQFGTNHI
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCC
GHFALTGWLLPLLNAGHARVTTMTSSAARHAKLNWEDLQSDQAYAPIRAYNQSKLANLLF
HHHHHHHHHHHHHCCCCEEEEEEEHHHHHHCCCCHHHHCCCCCCCCHHHCCHHHHHHHHH
ALELDRRSRAGGWGIVSNAAHPGTTLTGLYAAGPNLGREKSSPIEAAMKRLARWGVLVQG
EEEECCCCCCCCCCEECCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEC
VDRGLLPALYAATSPDAEGGHFYGPDGFGQFTGGPAELEIYRPARDEDAATRLWDVSQRL
CCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
AGVEFAAV
CCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383668 [H]