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The map label for this gene is 158315369

Identifier: 158315369

GI number: 158315369

Start: 4233807

End: 4234163

Strand: Direct

Name: 158315369

Synonym: Franean1_3571

Alternate gene names: NA

Gene position: 4233807-4234163 (Clockwise)

Preceding gene: 158315368

Following gene: 158315370

Centisome position: 47.14

GC content: 75.91

Gene sequence:

>357_bases
ATGCCCCGCGTTCATGACGACGCCGTACGCCGGCTCGCCGCGGCCTGCCGAGCGGGCGACGGCGTCGCGATCGAGGCCGT
CCTCGACCCGGACGCCGTCGCCGTGTGCGACAGCGGTGGCCACGTGCCCGCCCCGCTCCGACCCGTGCACGGAGCAGCCC
AGATCGCCCGGCTGATCCAGGCCCTGCTGCCCGGAGCCGACCTGACCGTCGAGAGCGTCAACGGGCGTGCCGCCCTGCTT
GTCCGCCGGGCCGGCACGGCCGTGGCCGTGATCGCCGTCGGCTGCCACGAGGACCGGGCCACGACCCTCTGGGCCGTGCT
GAATCCCGCCAAGCTGCGGGGCTGGCACCGCGGCTGA

Upstream 100 bases:

>100_bases
GTGCAGCACCCCCGGGAGGCATTCCTGGCCGGTGCCAACCCCCGCATGCCCGAGCCCGCCGAAACGGCGGATGCCCGGGT
GGACATTGTCACGGCAGGCG

Downstream 100 bases:

>100_bases
GCCTTGTACTGACAGGACATGGTTCCGGACGCCGAGTGGCGTCAGCGTTGAGGCATGAAGAAGGTAACCATGCAGAACAC
CATTGATCTGACCGGACGAC

Product: putative sigma factor

Products: NA

Alternate protein names: Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MPRVHDDAVRRLAAACRAGDGVAIEAVLDPDAVAVCDSGGHVPAPLRPVHGAAQIARLIQALLPGADLTVESVNGRAALL
VRRAGTAVAVIAVGCHEDRATTLWAVLNPAKLRGWHRG

Sequences:

>Translated_118_residues
MPRVHDDAVRRLAAACRAGDGVAIEAVLDPDAVAVCDSGGHVPAPLRPVHGAAQIARLIQALLPGADLTVESVNGRAALL
VRRAGTAVAVIAVGCHEDRATTLWAVLNPAKLRGWHRG
>Mature_117_residues
PRVHDDAVRRLAAACRAGDGVAIEAVLDPDAVAVCDSGGHVPAPLRPVHGAAQIARLIQALLPGADLTVESVNGRAALLV
RRAGTAVAVIAVGCHEDRATTLWAVLNPAKLRGWHRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12201; Mature: 12070

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVHDDAVRRLAAACRAGDGVAIEAVLDPDAVAVCDSGGHVPAPLRPVHGAAQIARLIQ
CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
ALLPGADLTVESVNGRAALLVRRAGTAVAVIAVGCHEDRATTLWAVLNPAKLRGWHRG
HHCCCCCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCHHHCCCCCC
>Mature Secondary Structure 
PRVHDDAVRRLAAACRAGDGVAIEAVLDPDAVAVCDSGGHVPAPLRPVHGAAQIARLIQ
CCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
ALLPGADLTVESVNGRAALLVRRAGTAVAVIAVGCHEDRATTLWAVLNPAKLRGWHRG
HHCCCCCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA