Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315318

Identifier: 158315318

GI number: 158315318

Start: 4180786

End: 4181313

Strand: Reverse

Name: 158315318

Synonym: Franean1_3519

Alternate gene names: NA

Gene position: 4181313-4180786 (Counterclockwise)

Preceding gene: 158315320

Following gene: 158315317

Centisome position: 46.55

GC content: 71.97

Gene sequence:

>528_bases
TTGCATTCTGTGCCATACCTCTTACGCAGTGTGTCATGGGACGTGTTCGGCGGGAACCACGCCGGCCACTTCCCCGGACC
AGCAGAGGAGCGCGTCGTGTACTCGTCCACGGAGGCGCCGGGCAGGTCCGTCGGCCGGACGTCCGCCGACATCGGCCGCG
CAGCCCCACCTGGGTCCGACGACGTACCTGGGTGGGTCGGCGCGGCCGAGGGGAGGGAGCCCGGACCGGCCGGCGACGCG
GCTCCCTCCCCGCCCCTGCCGGTCCGGGCGCCGCACGCGACCTGGCCGGGTCGTGGCCTGGTGTGCCGGGGGCGTGGTCG
TGTCGTCCGGTCGGGCGGCGGCGCTGGGGCCGGTGAGCGGACATGGGCGGTGGTCGTGCTCGACGTCGACGGTGACCCGG
TCGAGACTGTCATCGGTTTCACCCCGTTGGATGCCGCTGACACCTACGCCGAGTTCGATCCGGACATCACCCGCTGGACG
TCTGTTCCGTCCCGTCCCGGTCTTCCCAAACGGATCCCGGGGAGCTGA

Upstream 100 bases:

>100_bases
AGAGCGGGTCGCGGTTCAGGGCCCGGTCCAGTGTGCACGGTGGCTCCCTTCCAACCGGCCGGGTGGCTGTGTGTATCTGC
ATTGCAGGCAAGCACCTGCA

Downstream 100 bases:

>100_bases
AACGGCCCTGTCGGTCCTCCCCGACGGCCCTTCATACGGCCCCCCCGCCCCATCCGCCCACGCGCACGTCTCAGGGGGGC
GCGGGCGGGTCGGGCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MHSVPYLLRSVSWDVFGGNHAGHFPGPAEERVVYSSTEAPGRSVGRTSADIGRAAPPGSDDVPGWVGAAEGREPGPAGDA
APSPPLPVRAPHATWPGRGLVCRGRGRVVRSGGGAGAGERTWAVVVLDVDGDPVETVIGFTPLDAADTYAEFDPDITRWT
SVPSRPGLPKRIPGS

Sequences:

>Translated_175_residues
MHSVPYLLRSVSWDVFGGNHAGHFPGPAEERVVYSSTEAPGRSVGRTSADIGRAAPPGSDDVPGWVGAAEGREPGPAGDA
APSPPLPVRAPHATWPGRGLVCRGRGRVVRSGGGAGAGERTWAVVVLDVDGDPVETVIGFTPLDAADTYAEFDPDITRWT
SVPSRPGLPKRIPGS
>Mature_175_residues
MHSVPYLLRSVSWDVFGGNHAGHFPGPAEERVVYSSTEAPGRSVGRTSADIGRAAPPGSDDVPGWVGAAEGREPGPAGDA
APSPPLPVRAPHATWPGRGLVCRGRGRVVRSGGGAGAGERTWAVVVLDVDGDPVETVIGFTPLDAADTYAEFDPDITRWT
SVPSRPGLPKRIPGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18106; Mature: 18106

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSVPYLLRSVSWDVFGGNHAGHFPGPAEERVVYSSTEAPGRSVGRTSADIGRAAPPGSD
CCCHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DVPGWVGAAEGREPGPAGDAAPSPPLPVRAPHATWPGRGLVCRGRGRVVRSGGGAGAGER
CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCC
TWAVVVLDVDGDPVETVIGFTPLDAADTYAEFDPDITRWTSVPSRPGLPKRIPGS
EEEEEEEECCCCCCHHEECCCCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHSVPYLLRSVSWDVFGGNHAGHFPGPAEERVVYSSTEAPGRSVGRTSADIGRAAPPGSD
CCCHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DVPGWVGAAEGREPGPAGDAAPSPPLPVRAPHATWPGRGLVCRGRGRVVRSGGGAGAGER
CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCC
TWAVVVLDVDGDPVETVIGFTPLDAADTYAEFDPDITRWTSVPSRPGLPKRIPGS
EEEEEEEECCCCCCHHEECCCCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA