| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315223
Identifier: 158315223
GI number: 158315223
Start: 4053138
End: 4054232
Strand: Direct
Name: 158315223
Synonym: Franean1_3423
Alternate gene names: NA
Gene position: 4053138-4054232 (Clockwise)
Preceding gene: 158315220
Following gene: 158315225
Centisome position: 45.12
GC content: 61.74
Gene sequence:
>1095_bases ATGGAACTAACAGCAGATCAGTGCGCAGAATTAAATATTTTCGCGAAAAACTACGATACGCCAGCGCCGGTGGCGACGCG GGCCCGGATCGTGTTGTGGCAGACGGAGGGCCGACAGAAGAAAGAGATTGCCGCGCTGGCCGGGGTGTCCCGACCGACAG TGGACCTATGGATTTCCCGTTACCGGAAAGACGGGATTGATGGATTGTTCGACCGGCCTCGTGGTGCCCCGCGAGAACAG GTGCCGGCGATGGTGCGGGGCCGGATACTCGCCCTGACCAGGAAGAGTCCGCCGGCGGAGACCGGCTTGTCGCATTGGTC GAGCCGACAGATGACCACGTTCATCAAGCGCACCACGGGCGCGTCGGTCTCGCACTTCTATGTGGCGAAGCTGTGGCGGG ACCACGGGTTGAAGCCGTACCAGCAGGGCACCTTCAAGATCAGTAAGGATCCGCGCTTCGCGGAGAAGATCGCCGATATC GTCGGCCTCTACCTCGAATCGCCTGGAGGTGCGGTCGTGCTCAGCGTAGACGAAAAAGATCAGATCCAGGCGTTGGACCG CACCCAGCCGCTGCTGCCGATCACGTTCGGCGCCCGCGAGAAGCGCACCCACGACTACGTCCGCAACGGCACGACCAACC TGTTCGCCGCGTTGAACGTGGGGACCGGCGAGGTGTACGGCGAATGCCGGCCGGCTCGTGACGGTGCACACTTTCTCGCC TTTCTGAAGAACGCTGTCGAGCCCCATGCCGGCAGGGAGGTCCACATCGTGCTGGACAACCTCGGCATTCACACGACACC GGACGTCCGGTCCTGGCTTACGCAGAACCCGCATGTCCACTTCCACTTCACCCCGATCGGCTCGTCCTGGATCAACCAGA TCGAGACGTGGTTCGGTATCATCACCCGCCAGTCGATCCGCCGCGGCACCTTCTCCTCCGTCCAGATCCTCATCAACCAG ATCCGCGACTACATCGCTCATTGGAACAGCAACCCCGAGCCGTTCGTCTGGACCGCGACCGCGGACGAAATCCTGGCCAA AGTCCGCCTCGTTCAGGTGAGCGTCAAGAAGCTGGTCGGCAACAACAGCAAGTAA
Upstream 100 bases:
>100_bases GTCTCGTGAGAGCTGATACTTTACGTTACGCCAAGTTGATTCAAATCAATCCCGACACCGTGGACTTTACGTGTCCGCAG ATCGGGTGTGCCATACGAGT
Downstream 100 bases:
>100_bases AGGAAACGGAATCATGGGACACTAGCCCCGTCTTCCGCACATGGGCCCGTGACCTGCGGCAATACATTGATTGATTAACA TGTTCGGGTCGCTGACTTGC
Product: putative transposase
Products: NA
Alternate protein names: ISO-IS200 39 kDa protein [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISRYRKDGIDGLFDRPRGAPREQ VPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTGASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADI VGLYLESPGGAVVLSVDEKDQIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGIITRQSIRRGTFSSVQILINQ IRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVGNNSK
Sequences:
>Translated_364_residues MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISRYRKDGIDGLFDRPRGAPREQ VPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTGASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADI VGLYLESPGGAVVLSVDEKDQIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGIITRQSIRRGTFSSVQILINQ IRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVGNNSK >Mature_364_residues MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISRYRKDGIDGLFDRPRGAPREQ VPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTGASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADI VGLYLESPGGAVVLSVDEKDQIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGIITRQSIRRGTFSSVQILINQ IRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVGNNSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR001584 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 40921; Mature: 40921
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISR CCCCHHHHCEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHH YRKDGIDGLFDRPRGAPREQVPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTG HHHCCCCCHHCCCCCCCHHHCCHHHCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCC ASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADIVGLYLESPGGAVVLSVDEKD CCHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCHH QIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA HHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGI HHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH ITRQSIRRGTFSSVQILINQIRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVG HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHC NNSK CCCC >Mature Secondary Structure MELTADQCAELNIFAKNYDTPAPVATRARIVLWQTEGRQKKEIAALAGVSRPTVDLWISR CCCCHHHHCEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHH YRKDGIDGLFDRPRGAPREQVPAMVRGRILALTRKSPPAETGLSHWSSRQMTTFIKRTTG HHHCCCCCHHCCCCCCCHHHCCHHHCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCC ASVSHFYVAKLWRDHGLKPYQQGTFKISKDPRFAEKIADIVGLYLESPGGAVVLSVDEKD CCHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCHH QIQALDRTQPLLPITFGAREKRTHDYVRNGTTNLFAALNVGTGEVYGECRPARDGAHFLA HHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH FLKNAVEPHAGREVHIVLDNLGIHTTPDVRSWLTQNPHVHFHFTPIGSSWINQIETWFGI HHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH ITRQSIRRGTFSSVQILINQIRDYIAHWNSNPEPFVWTATADEILAKVRLVQVSVKKLVG HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHC NNSK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]