| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315119
Identifier: 158315119
GI number: 158315119
Start: 3930429
End: 3930677
Strand: Direct
Name: 158315119
Synonym: Franean1_3318
Alternate gene names: NA
Gene position: 3930429-3930677 (Clockwise)
Preceding gene: 158315118
Following gene: 158315120
Centisome position: 43.76
GC content: 68.27
Gene sequence:
>249_bases GTGCCCGTGGCTGACTTCACGATCCGCATTCCACGCGTATCGGTCGCGATCTCGGAGGCGGAGCTGCTCGAGCTTCTCGT GGAGGAGGGGGCGCGCGTGGAGGAGGGCGACCCGCTGTTCGTCATCGCGACGGACAAGGTCGAGTCCGAGGTACAGGCCG GCGCGTCCGGCACGGTGCACTGGAGCGGCGCGGTGGAGACCGTCTACGAGATCGGTGCCGAGATCGGGACGATCAGCGCG TCCAGCTGA
Upstream 100 bases:
>100_bases AACCCGGCCCCGCCGGCGCTGGAGTCGCAGGTGTACCCGGATTCCGAAAAGATCATCGCCGCCGTCCACCGGACGCTGCG GTGGAAAACCACCAGGGAAG
Downstream 100 bases:
>100_bases CGCCGGAACCGATCAGCTGACGCCGGCACAGACCAGCTGAGGCCGGCGCTGAGAGGAGGTTGATGTTGATGGCCGTCACC GACGACCGCCGGGCCGACGC
Product: biotin/lipoyl attachment domain-containing protein
Products: NA
Alternate protein names: Dihydrolipoamide Acetyltransferase
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPVADFTIRIPRVSVAISEAELLELLVEEGARVEEGDPLFVIATDKVESEVQAGASGTVHWSGAVETVYEIGAEIGTISA SS
Sequences:
>Translated_82_residues MPVADFTIRIPRVSVAISEAELLELLVEEGARVEEGDPLFVIATDKVESEVQAGASGTVHWSGAVETVYEIGAEIGTISA SS >Mature_81_residues PVADFTIRIPRVSVAISEAELLELLVEEGARVEEGDPLFVIATDKVESEVQAGASGTVHWSGAVETVYEIGAEIGTISAS S
Specific function: Unknown
COG id: COG0508
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8602; Mature: 8470
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVADFTIRIPRVSVAISEAELLELLVEEGARVEEGDPLFVIATDKVESEVQAGASGTVH CCCCCEEEECCEEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEE WSGAVETVYEIGAEIGTISASS ECCHHHHHHHHCCCCCEEECCC >Mature Secondary Structure PVADFTIRIPRVSVAISEAELLELLVEEGARVEEGDPLFVIATDKVESEVQAGASGTVH CCCCEEEECCEEEEEECHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEE WSGAVETVYEIGAEIGTISASS ECCHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA