| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is acoA [H]
Identifier: 158315117
GI number: 158315117
Start: 3928344
End: 3929342
Strand: Direct
Name: acoA [H]
Synonym: Franean1_3316
Alternate gene names: 158315117
Gene position: 3928344-3929342 (Clockwise)
Preceding gene: 158315116
Following gene: 158315118
Centisome position: 43.74
GC content: 71.57
Gene sequence:
>999_bases GTGACGACGGAGCAGGCGGCGGAGCCGGCGCTCGATGTGCGGCGTCGGCTGTACGAGCTGATGACGCTCATGAAGGCGGC CGACGATCGGCTGAGCAAGGGGATCGCCTCGGGCGAGCTGCAGTGCGTGTACTGGCCCTCACGTGGTCAGGAGGCGATCG CCGCGGCGGTGGGCGTGGTCCTCCGCCTGGACGATCAGCTGGTCACGACGTACCGCGGACTGCACGACCTGATCGGCAAG GGCGTGCCGCTGGTCGAGATCTACGGCGAGATGCTGGGCCGCCAGGTCGGCTCCGGCCGCGGCAAGGGCGGGACGATGCA CATCGCGCATCCCGACTCCGGCCTCATGATGTCGACGGGGATCGTGGGCGCGGGGCCCCCGGTCGCGGTCGGGCTGGCCA TGGCCGCACGGCGCAAGGGCCTCGACCGGGTGACGGTCGCCAGCTTCGGTGACGGGGCCACGAACACCGGCTCCTTCCAC GAGGCGGCGAACATGGCGGCGCTGTGGGACCTGCCGCTGGTGCTGGTCTGCCAGAACAACCAGTACGCCGAGATGACGCC GACCGGGCACACGATGAAGATCGCCCAGGTCGCGGACCGGGCGGCCGGCTACGGGATGCCGGGCGTCCGCGTCGACGGCA ACGACCCCCTCGCCGTCGTCGCCGCGCTGGAGGAGGCCGTCGAGCGGGCGAGAGCCGGCGCCGGCCCAACGCTCCTGGAA TGCGTGACGTTCCGGTTCCGCGGCCACTACTTCGGCGATCCGATGAAGTACATCCCGACGGAGCAGATGGACGCCGCGAT CGCGGCTGATCCCCTCCCGCGTTTCCGGTCACGTCTGTTGGACGACGGGATCTGCGGTGCGCGGGAGCTCGACGAGATCG AGACGGCCGCCGTCTCGGCGGTTGACGAGGCGCTGGCCGCCGTCCTGGCCGCGCCCGCCGCGGCACTCGACGAGCTGGAC CGGGACGTGTACGCCGATCCGCGCAACTGCCCCGCGTAG
Upstream 100 bases:
>100_bases GTCCTGACCAACCAGCTGCTCGCCGCCGGGAGCGAGGAATGACCGGAGGGGTCCGCCCCGGCCGCCGCCAGCCGGAGACC GGGTTAGACGAGGAGGGGCT
Downstream 100 bases:
>100_bases CGCAACTGCCCCGCGTAGCGCGACTGCCCCCGTAACGCGCGCTTAGAACGTGCATTCCGTATCGAACGTGGCCTGGCAAT GAGGTGGACGTGGACGAACG
Product: pyruvate dehydrogenase
Products: [dihydrolipoyllysine-residue acetyltransferase] ; $S-acetyldihydrolipoyllysine; CO2
Alternate protein names: Acetoin:DCPIP oxidoreductase-alpha; Ao:DCPIP OR; TPP-dependent acetoin dehydrogenase E1 subunit alpha [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTTEQAAEPALDVRRRLYELMTLMKAADDRLSKGIASGELQCVYWPSRGQEAIAAAVGVVLRLDDQLVTTYRGLHDLIGK GVPLVEIYGEMLGRQVGSGRGKGGTMHIAHPDSGLMMSTGIVGAGPPVAVGLAMAARRKGLDRVTVASFGDGATNTGSFH EAANMAALWDLPLVLVCQNNQYAEMTPTGHTMKIAQVADRAAGYGMPGVRVDGNDPLAVVAALEEAVERARAGAGPTLLE CVTFRFRGHYFGDPMKYIPTEQMDAAIAADPLPRFRSRLLDDGICGARELDEIETAAVSAVDEALAAVLAAPAAALDELD RDVYADPRNCPA
Sequences:
>Translated_332_residues MTTEQAAEPALDVRRRLYELMTLMKAADDRLSKGIASGELQCVYWPSRGQEAIAAAVGVVLRLDDQLVTTYRGLHDLIGK GVPLVEIYGEMLGRQVGSGRGKGGTMHIAHPDSGLMMSTGIVGAGPPVAVGLAMAARRKGLDRVTVASFGDGATNTGSFH EAANMAALWDLPLVLVCQNNQYAEMTPTGHTMKIAQVADRAAGYGMPGVRVDGNDPLAVVAALEEAVERARAGAGPTLLE CVTFRFRGHYFGDPMKYIPTEQMDAAIAADPLPRFRSRLLDDGICGARELDEIETAAVSAVDEALAAVLAAPAAALDELD RDVYADPRNCPA >Mature_331_residues TTEQAAEPALDVRRRLYELMTLMKAADDRLSKGIASGELQCVYWPSRGQEAIAAAVGVVLRLDDQLVTTYRGLHDLIGKG VPLVEIYGEMLGRQVGSGRGKGGTMHIAHPDSGLMMSTGIVGAGPPVAVGLAMAARRKGLDRVTVASFGDGATNTGSFHE AANMAALWDLPLVLVCQNNQYAEMTPTGHTMKIAQVADRAAGYGMPGVRVDGNDPLAVVAALEEAVERARAGAGPTLLEC VTFRFRGHYFGDPMKYIPTEQMDAAIAADPLPRFRSRLLDDGICGARELDEIETAAVSAVDEALAAVLAAPAAALDELDR DVYADPRNCPA
Specific function: Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde. The alpha subunit is probably the catalytic subunit of the enzyme [H]
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885543, Length=280, Percent_Identity=33.9285714285714, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI291084742, Length=282, Percent_Identity=34.7517730496454, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI4505685, Length=282, Percent_Identity=34.7517730496454, Blast_Score=149, Evalue=4e-36, Organism=Homo sapiens, GI291084744, Length=281, Percent_Identity=34.5195729537367, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI11386135, Length=314, Percent_Identity=29.6178343949045, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI258645172, Length=313, Percent_Identity=29.3929712460064, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI291084757, Length=282, Percent_Identity=30.4964539007092, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17536047, Length=288, Percent_Identity=34.7222222222222, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI32564172, Length=288, Percent_Identity=34.7222222222222, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI86563355, Length=327, Percent_Identity=27.82874617737, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI86563357, Length=327, Percent_Identity=27.82874617737, Blast_Score=117, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321026, Length=289, Percent_Identity=35.2941176470588, Blast_Score=160, Evalue=2e-40, Organism=Drosophila melanogaster, GI24639748, Length=327, Percent_Identity=33.6391437308869, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24639746, Length=280, Percent_Identity=33.9285714285714, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI24639740, Length=280, Percent_Identity=33.9285714285714, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI24639744, Length=280, Percent_Identity=33.9285714285714, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI28571106, Length=280, Percent_Identity=33.9285714285714, Blast_Score=146, Evalue=2e-35, Organism=Drosophila melanogaster, GI21355903, Length=335, Percent_Identity=26.2686567164179, Blast_Score=101, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: 1.2.4.1
Molecular weight: Translated: 35133; Mature: 35001
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEQAAEPALDVRRRLYELMTLMKAADDRLSKGIASGELQCVYWPSRGQEAIAAAVGVV CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH LRLDDQLVTTYRGLHDLIGKGVPLVEIYGEMLGRQVGSGRGKGGTMHIAHPDSGLMMSTG HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEECC IVGAGPPVAVGLAMAARRKGLDRVTVASFGDGATNTGSFHEAANMAALWDLPLVLVCQNN CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCHHHHCCCCEEEEECCC QYAEMTPTGHTMKIAQVADRAAGYGMPGVRVDGNDPLAVVAALEEAVERARAGAGPTLLE CEEEECCCCCEEHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH CVTFRFRGHYFGDPMKYIPTEQMDAAIAADPLPRFRSRLLDDGICGARELDEIETAAVSA HHHHHHCCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH VDEALAAVLAAPAAALDELDRDVYADPRNCPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTEQAAEPALDVRRRLYELMTLMKAADDRLSKGIASGELQCVYWPSRGQEAIAAAVGVV CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHH LRLDDQLVTTYRGLHDLIGKGVPLVEIYGEMLGRQVGSGRGKGGTMHIAHPDSGLMMSTG HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEECC IVGAGPPVAVGLAMAARRKGLDRVTVASFGDGATNTGSFHEAANMAALWDLPLVLVCQNN CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCHHHHCCCCEEEEECCC QYAEMTPTGHTMKIAQVADRAAGYGMPGVRVDGNDPLAVVAALEEAVERARAGAGPTLLE CEEEECCCCCEEHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH CVTFRFRGHYFGDPMKYIPTEQMDAAIAADPLPRFRSRLLDDGICGARELDEIETAAVSA HHHHHHCCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH VDEALAAVLAAPAAALDELDRDVYADPRNCPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pyruvate; [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine
Specific reaction: pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S- $acetyldihydrolipoyllysine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969503; 10368162; 9384377 [H]