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The map label for this gene is 158315072

Identifier: 158315072

GI number: 158315072

Start: 3868643

End: 3869281

Strand: Direct

Name: 158315072

Synonym: Franean1_3268

Alternate gene names: NA

Gene position: 3868643-3869281 (Clockwise)

Preceding gene: 158315065

Following gene: 158315074

Centisome position: 43.07

GC content: 67.14

Gene sequence:

>639_bases
GTGATCGTGCTGGCGGTCTGCTGGTACCTACGGTTCGCGCTGTCGTACCGGGACGTCGAGGAGCTGCTCGCCGAACGCGG
CATCGACGTTGATCACGTAACTGTGTACCGGTGGGTGCAGCGCTTCACACCCCTACTGGTCGAGGCAGCGAGGCCGTGCC
GGCACCGTCCCGGTGACAGATGGTTCGTCGACGAGACCTACGTCAAGGTCGCCGGCCGCTGGACCTACCTCTACCGGGCG
GTCGACCAGTACGGCCAGGTCATTGACGTCCTGACAAGCACCCGCCGCGACCAGACTGCCGCCCGCCGGTTCTTCACCCG
GGCGCTGGCAAATGGGCGCCGGCCGGTCGAGTTCACCACCGACAAGGCCCCGGTCTACCCGCGGATCCTCGACGAGTTCC
TGCCCGAGGCCTGCCACGTCGACGCCGCCCGGGAGAACAACCGGATCGAAGCCGACCACGGACGACTCAAAGCCCGACTC
CGGCCCATGCGCGGCCTGAAACGCCTCCGCTCAGTCCAGACGATCAGCATCGGCCACGCCCTCGTGCAGAACATCCGCCG
CGGCCACTACGAACTCGCCATCGACACCAACCCACAGCTTCGACTGGCAGCCGCGTTCACTGAACTCGCCGCCGCCTGA

Upstream 100 bases:

>100_bases
CACGCGGCTGCCGACCAGCCATGATCGAACGATGCGTCGACGTCGTGTCCGTCCACCGGCTCCGACATCGGAGTTCGTCG
GGTTCGGGTTCCCGCCTGAG

Downstream 100 bases:

>100_bases
CCGGTAGCCGGCCGCCGCCGCAGGCATGCCCCGCCCTCGTCGAACGCAACAGTGCCGTTGAGGGGAGGGCGACACCGGGT
CGCTTCCCACGTTCACTGAG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MIVLAVCWYLRFALSYRDVEELLAERGIDVDHVTVYRWVQRFTPLLVEAARPCRHRPGDRWFVDETYVKVAGRWTYLYRA
VDQYGQVIDVLTSTRRDQTAARRFFTRALANGRRPVEFTTDKAPVYPRILDEFLPEACHVDAARENNRIEADHGRLKARL
RPMRGLKRLRSVQTISIGHALVQNIRRGHYELAIDTNPQLRLAAAFTELAAA

Sequences:

>Translated_212_residues
MIVLAVCWYLRFALSYRDVEELLAERGIDVDHVTVYRWVQRFTPLLVEAARPCRHRPGDRWFVDETYVKVAGRWTYLYRA
VDQYGQVIDVLTSTRRDQTAARRFFTRALANGRRPVEFTTDKAPVYPRILDEFLPEACHVDAARENNRIEADHGRLKARL
RPMRGLKRLRSVQTISIGHALVQNIRRGHYELAIDTNPQLRLAAAFTELAAA
>Mature_212_residues
MIVLAVCWYLRFALSYRDVEELLAERGIDVDHVTVYRWVQRFTPLLVEAARPCRHRPGDRWFVDETYVKVAGRWTYLYRA
VDQYGQVIDVLTSTRRDQTAARRFFTRALANGRRPVEFTTDKAPVYPRILDEFLPEACHVDAARENNRIEADHGRLKARL
RPMRGLKRLRSVQTISIGHALVQNIRRGHYELAIDTNPQLRLAAAFTELAAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 24621; Mature: 24621

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLAVCWYLRFALSYRDVEELLAERGIDVDHVTVYRWVQRFTPLLVEAARPCRHRPGDR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
WFVDETYVKVAGRWTYLYRAVDQYGQVIDVLTSTRRDQTAARRFFTRALANGRRPVEFTT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEC
DKAPVYPRILDEFLPEACHVDAARENNRIEADHGRLKARLRPMRGLKRLRSVQTISIGHA
CCCCCCHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQNIRRGHYELAIDTNPQLRLAAAFTELAAA
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIVLAVCWYLRFALSYRDVEELLAERGIDVDHVTVYRWVQRFTPLLVEAARPCRHRPGDR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
WFVDETYVKVAGRWTYLYRAVDQYGQVIDVLTSTRRDQTAARRFFTRALANGRRPVEFTT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEC
DKAPVYPRILDEFLPEACHVDAARENNRIEADHGRLKARLRPMRGLKRLRSVQTISIGHA
CCCCCCHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQNIRRGHYELAIDTNPQLRLAAAFTELAAA
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]