| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is bglA [H]
Identifier: 158315058
GI number: 158315058
Start: 3850564
End: 3851907
Strand: Direct
Name: bglA [H]
Synonym: Franean1_3254
Alternate gene names: 158315058
Gene position: 3850564-3851907 (Clockwise)
Preceding gene: 158315057
Following gene: 158315059
Centisome position: 42.87
GC content: 72.1
Gene sequence:
>1344_bases GTGCCCAACGCCCGCGTCCCACTCCACCGCGACTCCTCTCGACAGTTCCCCGCCGAGCCGGGGGCGCCCACGGCGGCGCC GGCGACCACGGCTGCCTCAAAGGCCCCGACGGACTCGTCGAGGGCGGTGTTTCCCGATGGCTTTCTCTGGGGGGCGGCCA CCGCCCCGCATCAGGTGGAGGGCGGTAACGTCGGCTCGGAGATGTGGCGCTCCGAGTGGATGCCGAACTCGACGTTCGCC GAGCCGTCCGGGGACGCCTGCGACCACTACCACCGGTATCCGCAGGACATCGCCACTCTGGCGGGGCTGGGCCTGAACGC CTACCGGTTCGGGGTCGAGTGGGCGAGGGTCGAGCCCGAGGAGGGGTACTTCTCCCGCGCCGCGCTCGACCACTACCGGC GCATGGTGGCCACCTGCCTTGAGCACGGCGTGACACCGGTGGTGACCTACAGTCATTTCTCGTTGCCCCGGTGGTTCGCC GCGGCCGGCGGGTGGAGCAACCCGGCGGCCCCGGACCAGTTCGCCCGGTACGCGGCCCGGTTGACCGCGCACATCGGCGA TCTGGTGCCCTGGGTGTGCACCCTCAACGAGTCGAACGTCATCTCGTTGTTGCTGCACCTGCGGGTCGCGCCGGCTGCCG CCCGCGAGGACGGTCTCGGGCTGGCGGAGGCCCTCAGGGCCCCGGCGCCCGCCGGGACACCGAAACGCGGCGGTTGGCCG CCCCCGGACGTCGAGATCATGGCCAAGGTGCACCGCAGGGCGGTGGAGGCGATCAAATCCGGTCCCGGCAACCCGGCGGT GGGCTGGACGCTGGCCCTGATCGACATCCAGGCGGCCGAAGGCGGCGAGCAGCGTCAGCTGGCGGTGCGCCAGGCGGCCG AGCTCGACTGGCTCGAGGTGTCCCGGGACGACGACTTCGTGGGTGTACAGACCTACACGCGGGAACGAGTGGGGTCTGAA AAGGTGCTCCCGCCGCCGGAGGGCGCGGCCACGACGCAGACGGGCTGGGAGGTGTACCCGCCCGCGCTCGGGCACACGGT CCGGCTCGCCGCCGAACACGCCAGGGTCCCGATCCTGGTCACCGAGAACGGCATGGCCACCGATGACGACGACGCCCGCG TCGCTTACACCCGCGCCGCCCTGCATGGCCTGGCCGCTGCCGTCGCCGACGGCGTCGACGTGCGCGGCTACCTGCACTGG ACGCTGCTCGACAACTTCGAGTGGACGTCCGGCTTCGCGATGACCTTCGGCCTGATCGCGGTCGACCGGACGAACTTCGC GCGGGCGGTGAAGCCGTCGGCGCGCTGGCTCGGCGCGGTCGCGCGCGCCAACGGACTCGTCTGA
Upstream 100 bases:
>100_bases CCCTGCTCGACCGCCGCCGGCCCGATCCGGTCGGCGATCCGGCGGGCAACTTGTGGCAACCCGTTGCTGATCGGCTTCCG GATCGCTGACGCTTCGGCGC
Downstream 100 bases:
>100_bases CGGCCCAGGAAAAAAGAAGGAAGGAAGTTCATGTTGCGTCCCCGGGACACTGCCACGCGTGAGCGCAGGAACCTGAGCGG GTTGTGGGCGTTCCGCCTCG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MPNARVPLHRDSSRQFPAEPGAPTAAPATTAASKAPTDSSRAVFPDGFLWGAATAPHQVEGGNVGSEMWRSEWMPNSTFA EPSGDACDHYHRYPQDIATLAGLGLNAYRFGVEWARVEPEEGYFSRAALDHYRRMVATCLEHGVTPVVTYSHFSLPRWFA AAGGWSNPAAPDQFARYAARLTAHIGDLVPWVCTLNESNVISLLLHLRVAPAAAREDGLGLAEALRAPAPAGTPKRGGWP PPDVEIMAKVHRRAVEAIKSGPGNPAVGWTLALIDIQAAEGGEQRQLAVRQAAELDWLEVSRDDDFVGVQTYTRERVGSE KVLPPPEGAATTQTGWEVYPPALGHTVRLAAEHARVPILVTENGMATDDDDARVAYTRAALHGLAAAVADGVDVRGYLHW TLLDNFEWTSGFAMTFGLIAVDRTNFARAVKPSARWLGAVARANGLV
Sequences:
>Translated_447_residues MPNARVPLHRDSSRQFPAEPGAPTAAPATTAASKAPTDSSRAVFPDGFLWGAATAPHQVEGGNVGSEMWRSEWMPNSTFA EPSGDACDHYHRYPQDIATLAGLGLNAYRFGVEWARVEPEEGYFSRAALDHYRRMVATCLEHGVTPVVTYSHFSLPRWFA AAGGWSNPAAPDQFARYAARLTAHIGDLVPWVCTLNESNVISLLLHLRVAPAAAREDGLGLAEALRAPAPAGTPKRGGWP PPDVEIMAKVHRRAVEAIKSGPGNPAVGWTLALIDIQAAEGGEQRQLAVRQAAELDWLEVSRDDDFVGVQTYTRERVGSE KVLPPPEGAATTQTGWEVYPPALGHTVRLAAEHARVPILVTENGMATDDDDARVAYTRAALHGLAAAVADGVDVRGYLHW TLLDNFEWTSGFAMTFGLIAVDRTNFARAVKPSARWLGAVARANGLV >Mature_446_residues PNARVPLHRDSSRQFPAEPGAPTAAPATTAASKAPTDSSRAVFPDGFLWGAATAPHQVEGGNVGSEMWRSEWMPNSTFAE PSGDACDHYHRYPQDIATLAGLGLNAYRFGVEWARVEPEEGYFSRAALDHYRRMVATCLEHGVTPVVTYSHFSLPRWFAA AGGWSNPAAPDQFARYAARLTAHIGDLVPWVCTLNESNVISLLLHLRVAPAAAREDGLGLAEALRAPAPAGTPKRGGWPP PDVEIMAKVHRRAVEAIKSGPGNPAVGWTLALIDIQAAEGGEQRQLAVRQAAELDWLEVSRDDDFVGVQTYTRERVGSEK VLPPPEGAATTQTGWEVYPPALGHTVRLAAEHARVPILVTENGMATDDDDARVAYTRAALHGLAAAVADGVDVRGYLHWT LLDNFEWTSGFAMTFGLIAVDRTNFARAVKPSARWLGAVARANGLV
Specific function: Can Hydrolyze Salicin And Arbutin. [C]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI13273313, Length=463, Percent_Identity=27.645788336933, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI32481206, Length=167, Percent_Identity=37.125748502994, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI24497614, Length=187, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI110681710, Length=186, Percent_Identity=29.0322580645161, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI28376633, Length=123, Percent_Identity=32.520325203252, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI2367270, Length=462, Percent_Identity=27.4891774891775, Blast_Score=128, Evalue=9e-31, Organism=Escherichia coli, GI1789070, Length=480, Percent_Identity=25, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI2367174, Length=181, Percent_Identity=29.8342541436464, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17552856, Length=466, Percent_Identity=25.7510729613734, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17539390, Length=166, Percent_Identity=28.9156626506024, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356577, Length=485, Percent_Identity=27.0103092783505, Blast_Score=143, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017736 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 48155; Mature: 48024
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNARVPLHRDSSRQFPAEPGAPTAAPATTAASKAPTDSSRAVFPDGFLWGAATAPHQVE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCC GGNVGSEMWRSEWMPNSTFAEPSGDACDHYHRYPQDIATLAGLGLNAYRFGVEWARVEPE CCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHCCCEEEEECCC EGYFSRAALDHYRRMVATCLEHGVTPVVTYSHFSLPRWFAAAGGWSNPAAPDQFARYAAR CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHH LTAHIGDLVPWVCTLNESNVISLLLHLRVAPAAAREDGLGLAEALRAPAPAGTPKRGGWP HHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHCCCCCCCCCCCCCCC PPDVEIMAKVHRRAVEAIKSGPGNPAVGWTLALIDIQAAEGGEQRQLAVRQAAELDWLEV CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEE SRDDDFVGVQTYTRERVGSEKVLPPPEGAATTQTGWEVYPPALGHTVRLAAEHARVPILV CCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEHHCCCEEEEE TENGMATDDDDARVAYTRAALHGLAAAVADGVDVRGYLHWTLLDNFEWTSGFAMTFGLIA ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHEEEE VDRTNFARAVKPSARWLGAVARANGLV ECCCCHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PNARVPLHRDSSRQFPAEPGAPTAAPATTAASKAPTDSSRAVFPDGFLWGAATAPHQVE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCC GGNVGSEMWRSEWMPNSTFAEPSGDACDHYHRYPQDIATLAGLGLNAYRFGVEWARVEPE CCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHHCCCEEEEECCC EGYFSRAALDHYRRMVATCLEHGVTPVVTYSHFSLPRWFAAAGGWSNPAAPDQFARYAAR CCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHH LTAHIGDLVPWVCTLNESNVISLLLHLRVAPAAAREDGLGLAEALRAPAPAGTPKRGGWP HHHHHHHHHCEEEECCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHCCCCCCCCCCCCCCC PPDVEIMAKVHRRAVEAIKSGPGNPAVGWTLALIDIQAAEGGEQRQLAVRQAAELDWLEV CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEE SRDDDFVGVQTYTRERVGSEKVLPPPEGAATTQTGWEVYPPALGHTVRLAAEHARVPILV CCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEHHCCCEEEEE TENGMATDDDDARVAYTRAALHGLAAAVADGVDVRGYLHWTLLDNFEWTSGFAMTFGLIA ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHEEEE VDRTNFARAVKPSARWLGAVARANGLV ECCCCHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8277941 [H]