| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158315057
Identifier: 158315057
GI number: 158315057
Start: 3850061
End: 3850552
Strand: Direct
Name: 158315057
Synonym: Franean1_3253
Alternate gene names: NA
Gene position: 3850061-3850552 (Clockwise)
Preceding gene: 158315050
Following gene: 158315058
Centisome position: 42.86
GC content: 71.14
Gene sequence:
>492_bases ATGGACGGATTCGAGCTGTTCCAGTTGGGTCGCAGGCTGATGAAGCTCGGTGAGCAGGCGATCCCCGAGCTCGGGCTCCG GCAGCTGTCCGCCCCGACGCGCGCGGTCGTCTTCGACGTCTTCGGCAACCCGGGCAGCTCGATCTCGGACATCACCGCGC GGGTCAAGTTCCCGCAGAGTCAGGTCTCGGCGTGCGTGGCCAGGTTGCGCGAGGCGGGCGTCGTCGAGACGGTCACCGAC CCCGCCGACCGCCGCCGGACCCTCGTGCGTCCCACCGCCGAGGCGTTGCGGCGGTCCCAGGACCGGCCCCCGGCGCAGAT CGACGACGCGTTGTCCGGGGCGACAGGCAGTACCGACCCGGCGGAGATCCAACAGCTGAAGGACGCGCTCACCACCCTGG CCGCCCTGCTCGACCGCCGCCGGCCCGATCCGGTCGGCGATCCGGCGGGCAACTTGTGGCAACCCGTTGCTGATCGGCTT CCGGATCGCTGA
Upstream 100 bases:
>100_bases GAGCGGGCCGGAGGCAGGGCGGGAGCGGTGCGCCTGCGACACTGGCCCAGCGGGCAGAGTTACATCAAGATAGATGCATA GTGATTGCTGTAAGGATGCC
Downstream 100 bases:
>100_bases CGCTTCGGCGCGTGCCCAACGCCCGCGTCCCACTCCACCGCGACTCCTCTCGACAGTTCCCCGCCGAGCCGGGGGCGCCC ACGGCGGCGCCGGCGACCAC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQSQVSACVARLREAGVVETVTD PADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDPAEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRL PDR
Sequences:
>Translated_163_residues MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQSQVSACVARLREAGVVETVTD PADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDPAEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRL PDR >Mature_163_residues MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQSQVSACVARLREAGVVETVTD PADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDPAEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRL PDR
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17722; Mature: 17722
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCHHHHHHHHCCCHH QVSACVARLREAGVVETVTDPADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDP HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCH AEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRLPDR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCHHHHHHHHCCCHH QVSACVARLREAGVVETVTDPADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDP HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCH AEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRLPDR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA