Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158315057

Identifier: 158315057

GI number: 158315057

Start: 3850061

End: 3850552

Strand: Direct

Name: 158315057

Synonym: Franean1_3253

Alternate gene names: NA

Gene position: 3850061-3850552 (Clockwise)

Preceding gene: 158315050

Following gene: 158315058

Centisome position: 42.86

GC content: 71.14

Gene sequence:

>492_bases
ATGGACGGATTCGAGCTGTTCCAGTTGGGTCGCAGGCTGATGAAGCTCGGTGAGCAGGCGATCCCCGAGCTCGGGCTCCG
GCAGCTGTCCGCCCCGACGCGCGCGGTCGTCTTCGACGTCTTCGGCAACCCGGGCAGCTCGATCTCGGACATCACCGCGC
GGGTCAAGTTCCCGCAGAGTCAGGTCTCGGCGTGCGTGGCCAGGTTGCGCGAGGCGGGCGTCGTCGAGACGGTCACCGAC
CCCGCCGACCGCCGCCGGACCCTCGTGCGTCCCACCGCCGAGGCGTTGCGGCGGTCCCAGGACCGGCCCCCGGCGCAGAT
CGACGACGCGTTGTCCGGGGCGACAGGCAGTACCGACCCGGCGGAGATCCAACAGCTGAAGGACGCGCTCACCACCCTGG
CCGCCCTGCTCGACCGCCGCCGGCCCGATCCGGTCGGCGATCCGGCGGGCAACTTGTGGCAACCCGTTGCTGATCGGCTT
CCGGATCGCTGA

Upstream 100 bases:

>100_bases
GAGCGGGCCGGAGGCAGGGCGGGAGCGGTGCGCCTGCGACACTGGCCCAGCGGGCAGAGTTACATCAAGATAGATGCATA
GTGATTGCTGTAAGGATGCC

Downstream 100 bases:

>100_bases
CGCTTCGGCGCGTGCCCAACGCCCGCGTCCCACTCCACCGCGACTCCTCTCGACAGTTCCCCGCCGAGCCGGGGGCGCCC
ACGGCGGCGCCGGCGACCAC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQSQVSACVARLREAGVVETVTD
PADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDPAEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRL
PDR

Sequences:

>Translated_163_residues
MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQSQVSACVARLREAGVVETVTD
PADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDPAEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRL
PDR
>Mature_163_residues
MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQSQVSACVARLREAGVVETVTD
PADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDPAEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRL
PDR

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17722; Mature: 17722

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCHHHHHHHHCCCHH
QVSACVARLREAGVVETVTDPADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDP
HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCH
AEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRLPDR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDGFELFQLGRRLMKLGEQAIPELGLRQLSAPTRAVVFDVFGNPGSSISDITARVKFPQS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCHHHHHHHHCCCHH
QVSACVARLREAGVVETVTDPADRRRTLVRPTAEALRRSQDRPPAQIDDALSGATGSTDP
HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCH
AEIQQLKDALTTLAALLDRRRPDPVGDPAGNLWQPVADRLPDR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA