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The map label for this gene is ycgM [C]

Identifier: 158314946

GI number: 158314946

Start: 3691629

End: 3692447

Strand: Direct

Name: ycgM [C]

Synonym: Franean1_3137

Alternate gene names: 158314946

Gene position: 3691629-3692447 (Clockwise)

Preceding gene: 158314945

Following gene: 158314947

Centisome position: 41.1

GC content: 65.93

Gene sequence:

>819_bases
ATGCCGGAAACGCGGCGAATACTTCTGGACGGCGTCGTCACCACGGTGACGCGTGAGGCCGATGAGCTCGTCCTCGGTGA
CGGCCGCCGGGTGGCCGCCGCCACGGCCGTCCACCTTCCCCCGTGCGCGCCCACGAAGATCATCTGTGTGCATCTCAACT
ACGCGAGCCGCCGTGACGAGTTCGGCCATGCGGGCACAACGGCACCCACGTATTTCCACAAGCCGACGTCCTGCTTGAAC
AGCCACGGCGGGGCGGTCGTGATGCCCAAGAACTGCAACTATCTCAACTACGAGGGAGAGATCGGCATCGTCATCGGGCG
GACGGCACGCCACGTGCCGCCGCAATCCGCCGCGAAGTACATTGCCGGGTACACGATCGCCAACGACTTCGGGCTGCACG
ACTTCCGGGACACCGACGCCGGCTCCATGCTCCGGGTGAAGGGATCGGACACACTGGGGTCCGTCGGTCCGGGTCTCGTC
ACAGACTGGGACTTCCGGGGAAAGTCCATCCGAACGATCGTCAACGACGATGTGGTCCAAGCGGACACGACGGACGGCAT
GATCTGGGACATGCACTACCTCGTGGCCGACCTGGCTCGACTGATCACCCTGGAACCGGGCGATCTTATCTTGTCGGGGA
CACCGGCCAACTCGCGTCCGGTGAGCATCGGCGACCGTGTCACGGTGGAGGTAGAGGGCCTCGGCCGGCTGACCAACCAC
ATCGTCGTGGGGCCTCCGGTGCCGGACTACGCGGGCGCGATGCCCACCGACTCCGAGCAGGTGCGAGGGATCGCGCACGG
CACCGCGGTGCTCCGATGA

Upstream 100 bases:

>100_bases
GAGGACGCGGCGAACAGCTCCGTCTCAGCACGCTGAACCCCCCACGTCTGGGGCAAACAATCTCGTCTCGGACGCCCACT
ACCCGTAGCTAGGAGCGGCA

Downstream 100 bases:

>100_bases
CCGCCGGCCGCTCGAACGGCTCGGAGGCGCCGTACGGACCCCTCGCAGGGGTGACCGTCCTCGATCTCACGAGCTACGTG
TCCGGTCCGTTGTGCACCAT

Product: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPETRRILLDGVVTTVTREADELVLGDGRRVAAATAVHLPPCAPTKIICVHLNYASRRDEFGHAGTTAPTYFHKPTSCLN
SHGGAVVMPKNCNYLNYEGEIGIVIGRTARHVPPQSAAKYIAGYTIANDFGLHDFRDTDAGSMLRVKGSDTLGSVGPGLV
TDWDFRGKSIRTIVNDDVVQADTTDGMIWDMHYLVADLARLITLEPGDLILSGTPANSRPVSIGDRVTVEVEGLGRLTNH
IVVGPPVPDYAGAMPTDSEQVRGIAHGTAVLR

Sequences:

>Translated_272_residues
MPETRRILLDGVVTTVTREADELVLGDGRRVAAATAVHLPPCAPTKIICVHLNYASRRDEFGHAGTTAPTYFHKPTSCLN
SHGGAVVMPKNCNYLNYEGEIGIVIGRTARHVPPQSAAKYIAGYTIANDFGLHDFRDTDAGSMLRVKGSDTLGSVGPGLV
TDWDFRGKSIRTIVNDDVVQADTTDGMIWDMHYLVADLARLITLEPGDLILSGTPANSRPVSIGDRVTVEVEGLGRLTNH
IVVGPPVPDYAGAMPTDSEQVRGIAHGTAVLR
>Mature_271_residues
PETRRILLDGVVTTVTREADELVLGDGRRVAAATAVHLPPCAPTKIICVHLNYASRRDEFGHAGTTAPTYFHKPTSCLNS
HGGAVVMPKNCNYLNYEGEIGIVIGRTARHVPPQSAAKYIAGYTIANDFGLHDFRDTDAGSMLRVKGSDTLGSVGPGLVT
DWDFRGKSIRTIVNDDVVQADTTDGMIWDMHYLVADLARLITLEPGDLILSGTPANSRPVSIGDRVTVEVEGLGRLTNHI
VVGPPVPDYAGAMPTDSEQVRGIAHGTAVLR

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=244, Percent_Identity=31.1475409836066, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI40786394, Length=244, Percent_Identity=31.1475409836066, Blast_Score=108, Evalue=6e-24,
Organism=Escherichia coli, GI1787428, Length=195, Percent_Identity=29.7435897435897, Blast_Score=88, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17557057, Length=188, Percent_Identity=33.5106382978723, Blast_Score=88, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6324161, Length=228, Percent_Identity=25.8771929824561, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28572127, Length=216, Percent_Identity=32.8703703703704, Blast_Score=107, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24663695, Length=215, Percent_Identity=28.8372093023256, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28571789, Length=202, Percent_Identity=30.1980198019802, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 29148; Mature: 29017

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETRRILLDGVVTTVTREADELVLGDGRRVAAATAVHLPPCAPTKIICVHLNYASRRDE
CCCCCEEEHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEECCHHCCCC
FGHAGTTAPTYFHKPTSCLNSHGGAVVMPKNCNYLNYEGEIGIVIGRTARHVPPQSAAKY
CCCCCCCCCCEEECCHHHHHCCCCEEEEECCCCEEEECCCEEEEECCCCCCCCHHHHHHH
IAGYTIANDFGLHDFRDTDAGSMLRVKGSDTLGSVGPGLVTDWDFRGKSIRTIVNDDVVQ
HHEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCEEE
ADTTDGMIWDMHYLVADLARLITLEPGDLILSGTPANSRPVSIGDRVTVEVEGLGRLTNH
ECCCCCEEEHHHHHHHHHHHHEEECCCCEEEECCCCCCCCEECCCEEEEEECCCCCCCCE
IVVGPPVPDYAGAMPTDSEQVRGIAHGTAVLR
EEECCCCCCCCCCCCCCHHHHHEECCCEEECC
>Mature Secondary Structure 
PETRRILLDGVVTTVTREADELVLGDGRRVAAATAVHLPPCAPTKIICVHLNYASRRDE
CCCCEEEHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEECCHHCCCC
FGHAGTTAPTYFHKPTSCLNSHGGAVVMPKNCNYLNYEGEIGIVIGRTARHVPPQSAAKY
CCCCCCCCCCEEECCHHHHHCCCCEEEEECCCCEEEECCCEEEEECCCCCCCCHHHHHHH
IAGYTIANDFGLHDFRDTDAGSMLRVKGSDTLGSVGPGLVTDWDFRGKSIRTIVNDDVVQ
HHEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCEEE
ADTTDGMIWDMHYLVADLARLITLEPGDLILSGTPANSRPVSIGDRVTVEVEGLGRLTNH
ECCCCCEEEHHHHHHHHHHHHEEECCCCEEEECCCCCCCCEECCCEEEEEECCCCCCCCE
IVVGPPVPDYAGAMPTDSEQVRGIAHGTAVLR
EEECCCCCCCCCCCCCCHHHHHEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]