| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314791
Identifier: 158314791
GI number: 158314791
Start: 3501017
End: 3501670
Strand: Direct
Name: 158314791
Synonym: Franean1_2975
Alternate gene names: NA
Gene position: 3501017-3501670 (Clockwise)
Preceding gene: 158314790
Following gene: 158314792
Centisome position: 38.98
GC content: 71.56
Gene sequence:
>654_bases GTGACCCGCGCCGCCGAACCTCGACTGCCGCCCCTGCCGGTGGCCGAGTGGACGGAGGAGGACCGCGACCTGCTGCGGGG CAATCTGGCCCGCGCCGACCGGTACCTGTCCGGGGACGTCGATGCGCCGCCCATGCCGCCCATACTCGGCCTGTTGGCCC GTCATGCCCAGGTCGGCGCCCGCTGGCTGGCCTTCAACGGGACATTGATCGACTCCGGCGCGCTCTCCCCCCGCGACCGG GAGCTGCTGATCCTGCGGGTCGGCGCGCGGACGGGCTGCCGCTACCAGTGGGCGGAACACCTGCGCATGGCGCAGGCTGC GGGCCTGACCTCCGAGCAGATCAGCGCGGTGCGCGAGGGTGCGTCGGCGCCCCTGTGGAGCGAACGGGACGGCGACCTGC TGCGTGCCGCAGACCAGCTGGTGGACGAGCACGTCATCGACGACGCGTTGTGGGAACGGCTGGCCGGCCGCTTCGACGAG CGGCGGCTGCTTGAGGTCATCTTCGTGGTCGGCAGCTACGTGTGTCTCGCGATGCTGCTCAACAGCGTCGGACTGCTGCC CGAGACGGGCGCCGACCAGCTTCTCGCCCCGCGAAACCCCGGCGCGGTACACGCAGAATCCCGGGTCGAACCGGGTAGCC CGTCTGTTCCATGA
Upstream 100 bases:
>100_bases GCACCCCGGACGACATCGCCGCCGCGGCCGCCTTCCTCGCCTCGGAAGAGGCCGGCTTCATCACCGGCCAGGTACTGGGA GTCAACGGAGGATCCGTACT
Downstream 100 bases:
>100_bases CCGCATCACCACAGGAGGTGGACCATGCCGCGTTTCCCGAAACCACCGGAAGGCAGCTGGACACAGCACTATCCCGCCCT CGGGACGGAACCGGTGTCCT
Product: alkylhydroperoxidase
Products: NA
Alternate protein names: Alkylhydroperoxidase; Alkylhydroperoxidase Like Protein; 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTRAAEPRLPPLPVAEWTEEDRDLLRGNLARADRYLSGDVDAPPMPPILGLLARHAQVGARWLAFNGTLIDSGALSPRDR ELLILRVGARTGCRYQWAEHLRMAQAAGLTSEQISAVREGASAPLWSERDGDLLRAADQLVDEHVIDDALWERLAGRFDE RRLLEVIFVVGSYVCLAMLLNSVGLLPETGADQLLAPRNPGAVHAESRVEPGSPSVP
Sequences:
>Translated_217_residues MTRAAEPRLPPLPVAEWTEEDRDLLRGNLARADRYLSGDVDAPPMPPILGLLARHAQVGARWLAFNGTLIDSGALSPRDR ELLILRVGARTGCRYQWAEHLRMAQAAGLTSEQISAVREGASAPLWSERDGDLLRAADQLVDEHVIDDALWERLAGRFDE RRLLEVIFVVGSYVCLAMLLNSVGLLPETGADQLLAPRNPGAVHAESRVEPGSPSVP >Mature_216_residues TRAAEPRLPPLPVAEWTEEDRDLLRGNLARADRYLSGDVDAPPMPPILGLLARHAQVGARWLAFNGTLIDSGALSPRDRE LLILRVGARTGCRYQWAEHLRMAQAAGLTSEQISAVREGASAPLWSERDGDLLRAADQLVDEHVIDDALWERLAGRFDER RLLEVIFVVGSYVCLAMLLNSVGLLPETGADQLLAPRNPGAVHAESRVEPGSPSVP
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23722; Mature: 23591
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAAEPRLPPLPVAEWTEEDRDLLRGNLARADRYLSGDVDAPPMPPILGLLARHAQVGA CCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC RWLAFNGTLIDSGALSPRDRELLILRVGARTGCRYQWAEHLRMAQAAGLTSEQISAVREG EEEEECCEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC ASAPLWSERDGDLLRAADQLVDEHVIDDALWERLAGRFDERRLLEVIFVVGSYVCLAMLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NSVGLLPETGADQLLAPRNPGAVHAESRVEPGSPSVP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRAAEPRLPPLPVAEWTEEDRDLLRGNLARADRYLSGDVDAPPMPPILGLLARHAQVGA CCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC RWLAFNGTLIDSGALSPRDRELLILRVGARTGCRYQWAEHLRMAQAAGLTSEQISAVREG EEEEECCEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC ASAPLWSERDGDLLRAADQLVDEHVIDDALWERLAGRFDERRLLEVIFVVGSYVCLAMLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH NSVGLLPETGADQLLAPRNPGAVHAESRVEPGSPSVP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA