BacMap

Definition	Frankia sp. EAN1pec chromosome, complete genome.
Accession	NC_009921
Length	8,982,042

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The map label for this gene is fabG [H]

Identifier: 158314790

GI number: 158314790

Start: 3500256

End: 3501020

Strand: Direct

Name: fabG [H]

Synonym: Franean1_2974

Alternate gene names: 158314790

Gene position: 3500256-3501020 (Clockwise)

Preceding gene: 158314789

Following gene: 158314791

Centisome position: 38.97

GC content: 70.98

Gene sequence:

>765_bases
ATGCCGCGTACCAAGGCGCAGCTGTCTCGGGTGGCCGTGGTCACCGGCGGGGCGTCGGGCATAGGCGAGGCCACCTGCCA
CCACCTGGCTGAGCGCGGCCACCGCATCGCCGTCCTCGACCTCGACCGTGACGCGGCGAACCGGGTGGCCAAGGAGCTGC
AGGCTACCGGGGTGCAGGCGCTCGGCCTCGCGGCCGACGTCACCGATCGTCCCGCCCTCGATGCCGCCTTCGCCGAGATC
CGCTCGACGCTGGGCCCCACGGAGATCCTGGTGACCAGCGCCGGCCTCGTCGCGTTCGACCCGTTCGACCAGATCACGCT
CGAGCAGTGGAACCGCGTCGTCGAGGTGAACCTCACCGGCACCTTCCACTCCTGCCAGGCCGCCGTCTCCGACATGGTCG
CGGCACGGTGGGGCCGCATCGTCACCATCGCGTCGTCGAGCGCCCAGCGCGGCTCGCCGACCATGGCGCACTACGCGGCG
GCCAAAGGCGGGGTGATCGTCCTGACGAAGTCGCTGGCACGCGCCTACGCCTCCCACGGGATCACCGTCAACAGCATCCC
GCCGTCCGGGATCGAGACGCCGATGCAGCACCAGTCCCAGGCAGAGGGGAACCTGCCCCCCAACGAGGTGATGGCCGGCA
CCATCCCGCTCGGCCACCTGGGCACCCCGGACGACATCGCCGCCGCGGCCGCCTTCCTCGCCTCGGAAGAGGCCGGCTTC
ATCACCGGCCAGGTACTGGGAGTCAACGGAGGATCCGTACTGTGA

Upstream 100 bases:

>100_bases
TGACCCCCGACGAGGTCGCCGAAGGCTGGGTGCTCACGTGCCAGGCCATGCCGGTGACCCCGGTCATCGAAGTGGTCTAC
GAATGAGGAAGGACGAAGCG

Downstream 100 bases:

>100_bases
CCCGCGCCGCCGAACCTCGACTGCCGCCCCTGCCGGTGGCCGAGTGGACGGAGGAGGACCGCGACCTGCTGCGGGGCAAT
CTGGCCCGCGCCGACCGGTA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPRTKAQLSRVAVVTGGASGIGEATCHHLAERGHRIAVLDLDRDAANRVAKELQATGVQALGLAADVTDRPALDAAFAEI
RSTLGPTEILVTSAGLVAFDPFDQITLEQWNRVVEVNLTGTFHSCQAAVSDMVAARWGRIVTIASSSAQRGSPTMAHYAA
AKGGVIVLTKSLARAYASHGITVNSIPPSGIETPMQHQSQAEGNLPPNEVMAGTIPLGHLGTPDDIAAAAAFLASEEAGF
ITGQVLGVNGGSVL

Sequences:

>Translated_254_residues
MPRTKAQLSRVAVVTGGASGIGEATCHHLAERGHRIAVLDLDRDAANRVAKELQATGVQALGLAADVTDRPALDAAFAEI
RSTLGPTEILVTSAGLVAFDPFDQITLEQWNRVVEVNLTGTFHSCQAAVSDMVAARWGRIVTIASSSAQRGSPTMAHYAA
AKGGVIVLTKSLARAYASHGITVNSIPPSGIETPMQHQSQAEGNLPPNEVMAGTIPLGHLGTPDDIAAAAAFLASEEAGF
ITGQVLGVNGGSVL
>Mature_253_residues
PRTKAQLSRVAVVTGGASGIGEATCHHLAERGHRIAVLDLDRDAANRVAKELQATGVQALGLAADVTDRPALDAAFAEIR
STLGPTEILVTSAGLVAFDPFDQITLEQWNRVVEVNLTGTFHSCQAAVSDMVAARWGRIVTIASSSAQRGSPTMAHYAAA
KGGVIVLTKSLARAYASHGITVNSIPPSGIETPMQHQSQAEGNLPPNEVMAGTIPLGHLGTPDDIAAAAAFLASEEAGFI
TGQVLGVNGGSVL

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=36.078431372549, Blast_Score=138, Evalue=5e-33,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=32.295719844358, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=31.1475409836066, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI32483357, Length=259, Percent_Identity=29.7297297297297, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=28.3950617283951, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=32.5490196078431, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI4504505, Length=194, Percent_Identity=31.9587628865979, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=29.3172690763052, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=30.2631578947368, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI126723750, Length=257, Percent_Identity=27.2373540856031, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI66933014, Length=228, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI83715985, Length=183, Percent_Identity=34.4262295081967, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI4503301, Length=229, Percent_Identity=27.0742358078603, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI4503817, Length=187, Percent_Identity=25.1336898395722, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI210032110, Length=196, Percent_Identity=25.5102040816327, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=27.4193548387097, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI226371731, Length=194, Percent_Identity=29.8969072164948, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI142976729, Length=214, Percent_Identity=22.8971962616822, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI20149619, Length=200, Percent_Identity=30, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI31542939, Length=203, Percent_Identity=26.1083743842365, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787335, Length=248, Percent_Identity=38.7096774193548, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=31.7073170731707, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=32.4, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=32.9457364341085, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=31.7269076305221, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=34.4, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=33.739837398374, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=29.6296296296296, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=30.5220883534137, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=28.0487804878049, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=28.6885245901639, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=30.952380952381, Blast_Score=86, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=36.6935483870968, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=36.8421052631579, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=29.5275590551181, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=28.8973384030418, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=245, Percent_Identity=28.1632653061224, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17538182, Length=197, Percent_Identity=32.48730964467, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=27.8884462151394, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=28.3018867924528, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=27.8884462151394, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=26.8774703557312, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=28.1853281853282, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17561272, Length=227, Percent_Identity=27.7533039647577, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=189, Percent_Identity=29.6296296296296, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=259, Percent_Identity=27.7992277992278, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17567345, Length=208, Percent_Identity=26.4423076923077, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=27.8810408921933, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=26.865671641791, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=25.296442687747, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=27.5590551181102, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193203117, Length=188, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=270, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=188, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=26.2548262548263, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=247, Percent_Identity=29.5546558704453, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=200, Percent_Identity=25, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=28.2527881040892, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=28.9473684210526, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=28.0769230769231, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=26.1363636363636, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=27.7566539923954, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=27.6264591439689, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=273, Percent_Identity=25.6410256410256, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=26.5151515151515, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17563726, Length=268, Percent_Identity=27.2388059701493, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=25.9541984732824, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=209, Percent_Identity=22.0095693779904, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=247, Percent_Identity=29.1497975708502, Blast_Score=88, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6324126, Length=246, Percent_Identity=27.2357723577236, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=34.136546184739, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=31.1023622047244, Blast_Score=107, Evalue=8e-24,
Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=29.6747967479675, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24644339, Length=245, Percent_Identity=30.6122448979592, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=29.3877551020408, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=29.1497975708502, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17737361, Length=255, Percent_Identity=30.9803921568627, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24644337, Length=231, Percent_Identity=29.004329004329, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=31.5789473684211, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24640492, Length=238, Percent_Identity=24.3697478991597, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24649181, Length=193, Percent_Identity=30.0518134715026, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24643142, Length=250, Percent_Identity=26, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356301, Length=231, Percent_Identity=24.6753246753247, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24584744, Length=203, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI28574402, Length=203, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24581726, Length=165, Percent_Identity=26.0606060606061, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI21355631, Length=164, Percent_Identity=26.219512195122, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26175; Mature: 26044

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTKAQLSRVAVVTGGASGIGEATCHHLAERGHRIAVLDLDRDAANRVAKELQATGVQA
CCCCHHHHHEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHH
LGLAADVTDRPALDAAFAEIRSTLGPTEILVTSAGLVAFDPFDQITLEQWNRVVEVNLTG
HCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHHHCCEEEEEEECC
TFHSCQAAVSDMVAARWGRIVTIASSSAQRGSPTMAHYAAAKGGVIVLTKSLARAYASHG
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCC
ITVNSIPPSGIETPMQHQSQAEGNLPPNEVMAGTIPLGHLGTPDDIAAAAAFLASEEAGF
CEEECCCCCCCCCCHHHHHHCCCCCCHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCCE
ITGQVLGVNGGSVL
EEEEEEECCCCCCC
>Mature Secondary Structure 
PRTKAQLSRVAVVTGGASGIGEATCHHLAERGHRIAVLDLDRDAANRVAKELQATGVQA
CCCHHHHHEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHH
LGLAADVTDRPALDAAFAEIRSTLGPTEILVTSAGLVAFDPFDQITLEQWNRVVEVNLTG
HCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHHHCCEEEEEEECC
TFHSCQAAVSDMVAARWGRIVTIASSSAQRGSPTMAHYAAAKGGVIVLTKSLARAYASHG
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHCC
ITVNSIPPSGIETPMQHQSQAEGNLPPNEVMAGTIPLGHLGTPDDIAAAAAFLASEEAGF
CEEECCCCCCCCCCHHHHHHCCCCCCHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCCE
ITGQVLGVNGGSVL
EEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA