Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314781

Identifier: 158314781

GI number: 158314781

Start: 3490375

End: 3492438

Strand: Direct

Name: 158314781

Synonym: Franean1_2964

Alternate gene names: NA

Gene position: 3490375-3492438 (Clockwise)

Preceding gene: 158314775

Following gene: 158314785

Centisome position: 38.86

GC content: 68.17

Gene sequence:

>2064_bases
TTGCTCTTTGGTCGGAACAACTTCCTATCGGAGCCCCGCGTCTCCGTCGTCGCAGCCCCGGGGACACTCACACCGCGCAA
TGGTCACCGAACGTCACGGGCCGTTGCTGGGAATGGCTCACTGACCAACCCCGCCTGGGTCAAATTCCTCCTGTATGACA
ACAACGGGCAGATACGGGAGTCGCTGCGTCCGTTCTTCCCGAACCCGCGGAACACCCAGATGGTGGTTCGGCTAGCCGGT
AACACCTCGGCCAAGGACGAGGGCGCCGGCGTGGCGACCGTCGAGAAGGCCATGGCCAGGCACACCTTCGACCACGCCAC
CGTCGTCACCACCGGCGGCCCGGCGTTGCTGCGCGACATCAACGACTACCTGCACGGCGGCTTTCTCACCCTCGGCGGCA
TCGCGCTGGCGCTGATGGCCGGCCTGCTGCTCGTAGCGTTCGCCGTCCGCTGGCGCCTGCTCCCGCTCGGCGTGGTCACG
GTCGGCCTGGTCTGGGCCTTCGGTCTGGCCGGATACCTGGGTATCCCACTGTCCGTCATCACCATCGCCGGACTGCCGGT
GCTGCTCGGAGTCGGCATCGACTTCGCCGTTCAGCTGCACTCCAGAATCGAGGAGGAGGTGTCCCTCGACCGGGCCGCCC
ATCCGCTGCGGGAGACGCTGCGCAAGCTCGGCCCGGCCCTGCTCACCGCCACCCTCGCCAGCGTGCTGGCCTTCCTCGTG
CTGGAGTTCAGCGCGGTGCCGATGCTGCGGGACTTCGGCACGCTGCTCGCCGTCGGCCTGCCGGTCATCGTCATCGCCAC
GACCATGATCATGTTCGTCTCGCTGGGGTGGCGGGAATGCCGGTCGCCGACACCGGCCAGAGACTACACCGATGGCCCCC
TTGCCCGCATCGTGATCCGCCTCGGCGGCCTGCCCCGAACGGCTGCCCTGCCACTGGCGGTGCTGTCCGTCGCGGTCTTC
GTCGGCGGACTCTTCGCCGAGCAGAACCTGACCGTCCAGACCGACCCGGAAAGATGGGTCAGTCAGAACAGCCAGGTGGT
GAAGGATATCGACCAGGTGCGCGAGCGGGTGGGTGCGTCGGGCGAGCTGGGCCTGTTCGTCCAGGCGGACGATGTCTTCA
ACGACCGGACGACGCAGTACGTCTACCAGCTCGGCGCGCAGCGGACCGCCGAGAGCCAGGGCGATCTGCTCACCGCCTCC
AGCCTGCCGACCACCATCGGACTCCTGCTCAAGGTGCCGGGGACCACCACTGTGCTGCCCACTGGCGCGGACGTCATCGC
CGGGTTCAACGCCGCTCCCTGCGACATCCGAGTCGTCTCGGTCAGCATGACCGGCACGGCCGACCGGGCCGCGCTCTGCG
CCGCGACGCTGCGGCCGGGCGACGCCCATCCGGGTGCCTTCAACCTCGTCTTTCGCCAGGCGGACGTGTCGCTGCAGGAG
CGATCCGACGACCTCGACGCCCTCCGCGACCACCTTGCGCCGCCGGCGGGTGTCACCACCACTCTCTCGGGCTCGACTGT
CGTCGCAGTGGCCCTGCTGCACAACTTCGAGGCGAACCGCACAGACCTGACCTACTACGCGCTCGGCATCGTGTTCGTCT
TCGTCCTGCTGCGCCACCGCAACCTCGCCCGGGCACTGCTCTCGATGGCGCCGGTCCTGATCGCGGTGGGCCTTGGGTCC
CTGCTGTCCTGGGCCGTCGGCCTGGAACTCAGCCCGCTGACCGCGGTCGGCGGGCCACTCGTGATCGCGTTGTGCACCGA
GTTCACGACTCTTATGATATTTAGGTTCCTGGAGCAACGGCGGCGCGGCGACGCTCCACGCCAGGCAGTCGATGTCACCG
CTGCCCGCACCGGCCGAGCGTTTATGGTCTCGGCGCTGGCTGCGATTATCGGCATCCTGGTGCTCGCGCTCAGCTCGTTG
CCGCTGTTGCGGGACTTCGGCCTCGTCGTCGCGGTCAACGTGTTCGTCGCCCTGCTGTCGGCTCTGGTCGTGTTGCCGCC
GCTGCTGGTCTGGGCGGACGAGCGAGGCTGGTTACATCGGGCACCTACGTCGCCGGACGCCTGA

Upstream 100 bases:

>100_bases
TCCGCGACGAGAAGACCCGCCAGGCGGAAGACGGTGTGATCGCTGATGGGCAACTCGGCGGTGTATGTGAAACTCATGGA
GGCGCGGGGTTCCTTCGGAG

Downstream 100 bases:

>100_bases
TGGATGGTGGACGCTGGCTGGCAGGCCATCGGCGGCTACGTCCGTGTCAGGCACGCGCAGGAGCGGTGGTCCTGCGGTCA
CCCATCGCCACCGGCGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrophobe/Amphiphile Efflux-3 Family Efflux Transporter; HAE1 Family Efflux Transporter; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; MMPL Domain-Containing Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; MMPL Family Protein; Hydrophobe/Amphiphile Efflux-3 Family Transporter; Protein Export Membrane Protein; RND Efflux Transporter

Number of amino acids: Translated: 687; Mature: 687

Protein sequence:

>687_residues
MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRESLRPFFPNPRNTQMVVRLAG
NTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDINDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVT
VGLVWAFGLAGYLGIPLSVITIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV
LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIRLGGLPRTAALPLAVLSVAVF
VGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGASGELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTAS
SLPTTIGLLLKVPGTTTVLPTGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE
RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHRNLARALLSMAPVLIAVGLGS
LLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQRRRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSL
PLLRDFGLVVAVNVFVALLSALVVLPPLLVWADERGWLHRAPTSPDA

Sequences:

>Translated_687_residues
MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRESLRPFFPNPRNTQMVVRLAG
NTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDINDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVT
VGLVWAFGLAGYLGIPLSVITIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV
LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIRLGGLPRTAALPLAVLSVAVF
VGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGASGELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTAS
SLPTTIGLLLKVPGTTTVLPTGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE
RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHRNLARALLSMAPVLIAVGLGS
LLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQRRRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSL
PLLRDFGLVVAVNVFVALLSALVVLPPLLVWADERGWLHRAPTSPDA
>Mature_687_residues
MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRESLRPFFPNPRNTQMVVRLAG
NTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDINDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVT
VGLVWAFGLAGYLGIPLSVITIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV
LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIRLGGLPRTAALPLAVLSVAVF
VGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGASGELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTAS
SLPTTIGLLLKVPGTTTVLPTGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE
RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHRNLARALLSMAPVLIAVGLGS
LLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQRRRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSL
PLLRDFGLVVAVNVFVALLSALVVLPPLLVWADERGWLHRAPTSPDA

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73077; Mature: 73077

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRE
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHEEEEEEECCCCHHHH
SLRPFFPNPRNTQMVVRLAGNTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDI
HCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
NDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVTVGLVWAFGLAGYLGIPLSVI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHH
LGGLPRTAALPLAVLSVAVFVGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGAS
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHCCC
GELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTASSLPTTIGLLLKVPGTTTVLP
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHEEECCCCCEEEC
TGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE
CCHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHH
RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHR
CCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
NLARALLSMAPVLIAVGLGSLLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSLPLLRDFGLVVAVNVFVALLS
HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ALVVLPPLLVWADERGWLHRAPTSPDA
HHHHHCCHHEEECCCCCEECCCCCCCC
>Mature Secondary Structure
MLFGRNNFLSEPRVSVVAAPGTLTPRNGHRTSRAVAGNGSLTNPAWVKFLLYDNNGQIRE
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHEEEEEEECCCCHHHH
SLRPFFPNPRNTQMVVRLAGNTSAKDEGAGVATVEKAMARHTFDHATVVTTGGPALLRDI
HCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
NDYLHGGFLTLGGIALALMAGLLLVAFAVRWRLLPLGVVTVGLVWAFGLAGYLGIPLSVI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TIAGLPVLLGVGIDFAVQLHSRIEEEVSLDRAAHPLRETLRKLGPALLTATLASVLAFLV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEFSAVPMLRDFGTLLAVGLPVIVIATTMIMFVSLGWRECRSPTPARDYTDGPLARIVIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHH
LGGLPRTAALPLAVLSVAVFVGGLFAEQNLTVQTDPERWVSQNSQVVKDIDQVRERVGAS
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCHHHHHHHHHHHHHHCCC
GELGLFVQADDVFNDRTTQYVYQLGAQRTAESQGDLLTASSLPTTIGLLLKVPGTTTVLP
CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHEEECCCCCEEEC
TGADVIAGFNAAPCDIRVVSVSMTGTADRAALCAATLRPGDAHPGAFNLVFRQADVSLQE
CCHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHH
RSDDLDALRDHLAPPAGVTTTLSGSTVVAVALLHNFEANRTDLTYYALGIVFVFVLLRHR
CCCHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
NLARALLSMAPVLIAVGLGSLLSWAVGLELSPLTAVGGPLVIALCTEFTTLMIFRFLEQR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RRGDAPRQAVDVTAARTGRAFMVSALAAIIGILVLALSSLPLLRDFGLVVAVNVFVALLS
HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ALVVLPPLLVWADERGWLHRAPTSPDA
HHHHHCCHHEEECCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA