Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314772

Identifier: 158314772

GI number: 158314772

Start: 3477569

End: 3478816

Strand: Direct

Name: 158314772

Synonym: Franean1_2954

Alternate gene names: NA

Gene position: 3477569-3478816 (Clockwise)

Preceding gene: 158314771

Following gene: 158314773

Centisome position: 38.72

GC content: 64.02

Gene sequence:

>1248_bases
ATGAAGAGATTATGTGTCGTCGTCGTGGTGGCGGCGCTCGCCGCGGTAATACTGGCTGCCTGCGGCTCCGGCTCCGGCTC
CGGCTCCAGCGCCGGCGGCGGCATTGGCACAGCAAAAGGGGACCCGATCGTCGTCGGGACGATTTGCAGCTGCTCGGGAG
CCCAGGCGGCCTCGACCGCCAAGGTCAAGGATGTCGCCCAGGTCTGGGCCGAGTCGGTCAACGCCCGCGGTGGCATCAAC
GGCCATCCCGTAAAAATGATTGTCGAGGACGATGCCGGCGACCCGGCCAAGGCTCTGCGGGCCGCGAAGAAACTGGTCGA
GCAGGACCACGTCGTTGCCATCGTCGGCCAGATGAGCCTCGCCGACGCCACATGGGCCGACTATACGTCGAAGAAGGGTG
TGCCGGTGGTCGGCGGGATCTCCGCCACGATCCCGTACCTTACGGAGCCGACCTTCTTCGCCTCGGGTACCACATTGCCG
GCGCTTGTGGCAGGCACCCTGCTGACGGGAAAGGAAGCAGGCAAGACCAAGCTCGGGGTATTGTACTGCTCCGAGTCGCC
CTCGTGCTCGCAACTTGACCTGTTCACCAAGGCAGCTGCTGGGATTGTGGGAGGCATCATTGTCACGTCGGCGAAGATAT
CCTCGACCGCGCCGAACTACACAGCTCCTTGCCTGGGACTGAAGCGGGCCGGTGTGGACAGCATAACCCTCTCGGCGAAC
AACACGGTCGTAGCGCGCGTCATGGAGGCCTGCGCGCAGCAGGGACTCCATCCCACCATGGTCAGCCAATTCGCCACGAG
TGCACCGGAGTGGCTTCGTAATCCCAACTTCGAGGGCGCTTTGCTGACATCGCAGACCGCCGTGCCGGTCGCGTCCGCAC
CAGCCGGCAAAGAGTTCCTGGACGCAGTGGCAAAATTCGCCCCTGGGCTCACCCGTGACCCTCAGTTCACCCCGGCTACG
ATCCTGGCATGGGCCGGCGGAAAGCTGTTCGAGGCGGCGGCCAAGGCAGGTGGTGTCGGACCGAACTCGACGCCCACTGA
TGTCATGAAGGGCCTCTACACCCTCAAGAACGAGACGCTCGGTGGCCTCGCTCCGCCACTAACCTTCACGAAGGGCAAGC
CCGCTGTCCCGACCTGCTACTTCACCACCCAGATCCATAACGGCGAGTACATACTGCCGGATGGGCCCGCGCCTAAGTGC
CTAACCCCGTCCCAGGTCGAGGCGTTCGGGAAATTGCTCGCGGGATAA

Upstream 100 bases:

>100_bases
CTTGTGTCGTCGCTTCGAAATATTGCGTTGCCCTTGTTCGCCGGGGGTGGGATGGAATTCATTAAGTCATGTCAAAATCT
TCTGAAGGGTGACCATTGCT

Downstream 100 bases:

>100_bases
GCGCATCCCTCAACAGGAGATGTAGACCAAGAACCCGGACGACCAAGATCCCCGCGCCGCAACTTGGCGGCGTGGGGACC
GATGTAATGGCCGCGCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTAKVKDVAQVWAESVNARGGIN
GHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSLADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLP
ALVAGTLLTGKEAGKTKLGVLYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN
NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFLDAVAKFAPGLTRDPQFTPAT
ILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETLGGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKC
LTPSQVEAFGKLLAG

Sequences:

>Translated_415_residues
MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTAKVKDVAQVWAESVNARGGIN
GHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSLADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLP
ALVAGTLLTGKEAGKTKLGVLYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN
NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFLDAVAKFAPGLTRDPQFTPAT
ILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETLGGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKC
LTPSQVEAFGKLLAG
>Mature_415_residues
MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTAKVKDVAQVWAESVNARGGIN
GHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSLADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLP
ALVAGTLLTGKEAGKTKLGVLYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN
NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFLDAVAKFAPGLTRDPQFTPAT
ILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETLGGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKC
LTPSQVEAFGKLLAG

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41943; Mature: 41943

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00583 PFKB_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
KVKDVAQVWAESVNARGGINGHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSL
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHH
ADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLPALVAGTLLTGKEAGKTKLGV
CCCHHHHHCCCCCCCEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCEEEE
LYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN
EEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECC
NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFL
CHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHH
DAVAKFAPGLTRDPQFTPATILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETL
HHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
GGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKCLTPSQVEAFGKLLAG
CCCCCCCEECCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLCVVVVVAALAAVILAACGSGSGSGSSAGGGIGTAKGDPIVVGTICSCSGAQAASTA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
KVKDVAQVWAESVNARGGINGHPVKMIVEDDAGDPAKALRAAKKLVEQDHVVAIVGQMSL
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHH
ADATWADYTSKKGVPVVGGISATIPYLTEPTFFASGTTLPALVAGTLLTGKEAGKTKLGV
CCCHHHHHCCCCCCCEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCEEEE
LYCSESPSCSQLDLFTKAAAGIVGGIIVTSAKISSTAPNYTAPCLGLKRAGVDSITLSAN
EEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECC
NTVVARVMEACAQQGLHPTMVSQFATSAPEWLRNPNFEGALLTSQTAVPVASAPAGKEFL
CHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHH
DAVAKFAPGLTRDPQFTPATILAWAGGKLFEAAAKAGGVGPNSTPTDVMKGLYTLKNETL
HHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
GGLAPPLTFTKGKPAVPTCYFTTQIHNGEYILPDGPAPKCLTPSQVEAFGKLLAG
CCCCCCCEECCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA