| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is echA8 [H]
Identifier: 158314743
GI number: 158314743
Start: 3441417
End: 3442226
Strand: Direct
Name: echA8 [H]
Synonym: Franean1_2924
Alternate gene names: 158314743
Gene position: 3441417-3442226 (Clockwise)
Preceding gene: 158314742
Following gene: 158314744
Centisome position: 38.31
GC content: 62.72
Gene sequence:
>810_bases ATGGACTACGAACACGTCGAGTACGAAGTTGAGGAACAGATCGGCGTCATTACGCTGAACCGACCGCAGTCGGCCAACGC CCAGAGCGCGAAGGTGCTGCGCGAACTCGATGACGCCTGGCGGACCGCTGACAAGGATGCGCAAGTCAAAGTCATCCTTC TGAAGTCAAACGGCAGGCATTTCTCCGCCGGCCACGACATGTCCAGAACAGACGATGAAAGCGAGCGACGCCCAGACTGG ACACCCGACAGCGGCTACGACTGGGAGACTCGGCACTACCTGCACTACGCAAAGACGTGGCGTAACATCCCCAAGCCTTC GATCGCCGCCGTCCAGGGCAAGTGCATCGCAGGAGGCCTCATGCTGTGCTGGCCCTGCGATCTCATCATCGCCGCCGACA ACGCCGAGTTCTCCGACCCCGTCCTGTTCATGGGCCTCGCTGGCGTCGAGTACCATGCTCACACTTGGGAATTGGGTCCG CGCAGGGCCAAGGAGCTGCTGTTCACCGGCGACCCAGTCCTCGCTGAAGAAGCTCTCGGACTCGGCATGGTCAACAAGGT CGTACCCCTCGATGACCTCGTGACGGCCGCCATGGCGATGGCCCGACGCATAGCGCGGCAGGACACCTTCGCGCTGCGCA TGGCCAAGCACGCCGTAAACCACACGCTCGACGTGCAGGGCTTCACCACCTCCGTCGACGCCGTCTTCGACATGCACCAC CTCGGGCATGCCCGCGCCGCACTCCTCAACAGCGGTATCCCCTCCCTAGCCGGACTTTCTTCCATGAAGGGCCGCAGCCA GGCCACATGA
Upstream 100 bases:
>100_bases TCTCGCTGGACAGAACCGACGCGCACGGGAACGGGCGAGATTGTCTTACAACCGCTGGACCGATCGCAAGAGGCGCCCAC CTCATGGACGAAGGAGACCG
Downstream 100 bases:
>100_bases CCAGGTCAGCCGTCGGGGCTGACTCTCATGTGTTGGCAGGCGGCCGAAGCTACCCCAAGGGCAGGAGCCGGGGGCTTACC ACCCTTGACAGAGCCTCCCA
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MDYEHVEYEVEEQIGVITLNRPQSANAQSAKVLRELDDAWRTADKDAQVKVILLKSNGRHFSAGHDMSRTDDESERRPDW TPDSGYDWETRHYLHYAKTWRNIPKPSIAAVQGKCIAGGLMLCWPCDLIIAADNAEFSDPVLFMGLAGVEYHAHTWELGP RRAKELLFTGDPVLAEEALGLGMVNKVVPLDDLVTAAMAMARRIARQDTFALRMAKHAVNHTLDVQGFTTSVDAVFDMHH LGHARAALLNSGIPSLAGLSSMKGRSQAT
Sequences:
>Translated_269_residues MDYEHVEYEVEEQIGVITLNRPQSANAQSAKVLRELDDAWRTADKDAQVKVILLKSNGRHFSAGHDMSRTDDESERRPDW TPDSGYDWETRHYLHYAKTWRNIPKPSIAAVQGKCIAGGLMLCWPCDLIIAADNAEFSDPVLFMGLAGVEYHAHTWELGP RRAKELLFTGDPVLAEEALGLGMVNKVVPLDDLVTAAMAMARRIARQDTFALRMAKHAVNHTLDVQGFTTSVDAVFDMHH LGHARAALLNSGIPSLAGLSSMKGRSQAT >Mature_269_residues MDYEHVEYEVEEQIGVITLNRPQSANAQSAKVLRELDDAWRTADKDAQVKVILLKSNGRHFSAGHDMSRTDDESERRPDW TPDSGYDWETRHYLHYAKTWRNIPKPSIAAVQGKCIAGGLMLCWPCDLIIAADNAEFSDPVLFMGLAGVEYHAHTWELGP RRAKELLFTGDPVLAEEALGLGMVNKVVPLDDLVTAAMAMARRIARQDTFALRMAKHAVNHTLDVQGFTTSVDAVFDMHH LGHARAALLNSGIPSLAGLSSMKGRSQAT
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=230, Percent_Identity=30.4347826086957, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI31542718, Length=194, Percent_Identity=34.020618556701, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI70995211, Length=184, Percent_Identity=32.0652173913043, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI45643119, Length=223, Percent_Identity=25.1121076233184, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI260275230, Length=223, Percent_Identity=25.1121076233184, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI260274832, Length=223, Percent_Identity=25.1121076233184, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1788597, Length=230, Percent_Identity=34.7826086956522, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787659, Length=219, Percent_Identity=28.310502283105, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082183, Length=276, Percent_Identity=27.536231884058, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787660, Length=234, Percent_Identity=32.4786324786325, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI221142681, Length=211, Percent_Identity=31.7535545023697, Blast_Score=81, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17554946, Length=220, Percent_Identity=30.4545454545455, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25145438, Length=234, Percent_Identity=29.9145299145299, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17540306, Length=186, Percent_Identity=28.494623655914, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17534483, Length=220, Percent_Identity=24.0909090909091, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17535521, Length=181, Percent_Identity=25.414364640884, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17540714, Length=219, Percent_Identity=26.027397260274, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560910, Length=216, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI20129971, Length=228, Percent_Identity=30.7017543859649, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24653477, Length=228, Percent_Identity=30.7017543859649, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI21357171, Length=238, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24653139, Length=223, Percent_Identity=30.0448430493274, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24650670, Length=216, Percent_Identity=28.7037037037037, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI19920382, Length=227, Percent_Identity=26.8722466960352, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI19922422, Length=187, Percent_Identity=26.7379679144385, Blast_Score=71, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 29789; Mature: 29789
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYEHVEYEVEEQIGVITLNRPQSANAQSAKVLRELDDAWRTADKDAQVKVILLKSNGRH CCCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCE FSAGHDMSRTDDESERRPDWTPDSGYDWETRHYLHYAKTWRNIPKPSIAAVQGKCIAGGL ECCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHCCCE MLCWPCDLIIAADNAEFSDPVLFMGLAGVEYHAHTWELGPRRAKELLFTGDPVLAEEALG EEEECCEEEEEECCCCCCCCEEEEEECCCEEECEEECCCHHHHHHHEECCCCHHHHHHHC LGMVNKVVPLDDLVTAAMAMARRIARQDTFALRMAKHAVNHTLDVQGFTTSVDAVFDMHH CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHH LGHARAALLNSGIPSLAGLSSMKGRSQAT HHHHHHHHHHCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure MDYEHVEYEVEEQIGVITLNRPQSANAQSAKVLRELDDAWRTADKDAQVKVILLKSNGRH CCCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCE FSAGHDMSRTDDESERRPDWTPDSGYDWETRHYLHYAKTWRNIPKPSIAAVQGKCIAGGL ECCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCHHCCCE MLCWPCDLIIAADNAEFSDPVLFMGLAGVEYHAHTWELGPRRAKELLFTGDPVLAEEALG EEEECCEEEEEECCCCCCCCEEEEEECCCEEECEEECCCHHHHHHHEECCCCHHHHHHHC LGMVNKVVPLDDLVTAAMAMARRIARQDTFALRMAKHAVNHTLDVQGFTTSVDAVFDMHH CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHH LGHARAALLNSGIPSLAGLSSMKGRSQAT HHHHHHHHHHCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]