Click here to switch to the map view.

The map label for this gene is acdA [H]

Identifier: 158314741

GI number: 158314741

Start: 3438677

End: 3439927

Strand: Direct

Name: acdA [H]

Synonym: Franean1_2922

Alternate gene names: 158314741

Gene position: 3438677-3439927 (Clockwise)

Preceding gene: 158314740

Following gene: 158314742

Centisome position: 38.28

GC content: 66.91

Gene sequence:

>1251_bases
ATGAGTCCGACGGCTACTGAGAGCTTGGATGGCTTCCGCGACCGGGCCCGAAAGTTCATCCGAGCCAACTTAGAACCTGC
CGCGCCGTCCGTGGCCACCAGCCTGCGCGGGGGGCGCAGTGACGAGGAGGAGCTCGCCGCTGTTACTCGCGACCGGGAAC
TCCAGCGGCTTTTGTTCGACGCCGGGCTCGCCGGTATCTGCTTTCCCCGCGAGTACGGCGGCCAAGGGCTCACCCCAGCG
CACCAGGCCGTCCTGAACGACGAGTTAGGCGGGTACGAGTACCCGTCACACCTCCAATCGCCGTCAATCTCCCAGTGCGG
CCCGGTACTTCTGGAGTTCGGTACTGAGGAACAGAAGCGCGAACACATCCCGGCGCTGCTCCGCGGGGACGAGATCTGGA
TGCAGTTCCTGTCCGAGCCCGGCAGCGGATCCGATGTGGCGGCCGCTCTCACCAGCGCCGTACGTGATGGCGACGACTGG
GTGCTCAACGGCTCGAAGATCTGGACGACCGGCGCCTGGTGGTCCGACTGGGCACTCTGCCTCGCCCGCTCGAACTGGGA
CGTCCCGAAGCACAGGGGCCTCACCGTTTTCATGGTGCCGATCCGGCATCCGGGCATCAAGGTCCACCGCATCGAGCTCC
TGAGCGGTTCCCAGGAGTTCTGCCAGGAGTTCATGACCGACGTACGGATCCCCGATGCCTACCGCATCGGCGAGGTCGAC
GGCGGGTGGACGGTCGGAGTCCGCTGGATGTTCCACGAACGTCTCGGCACGAGCTCTCCTCTCGTCACCCTCTCGGGTGG
CTCGCACCTCGGCCGGTCCACCGACCCCGTCGCGGTGGCCCGCGCGACCGGGCGTCTGGACGATCCGACCGCCCGCGATC
TCATCGGAGAGGCTCGCACTCTCGAACTCGTCGGAGGCGCGCTGTCGAGCCGCCTGGCCTCGGCGATATCCGGCGGGCAG
ATGTCAGACCAGGCAGCCGCCATCGGGCGGCTCTTCAGCGGAGTGGCCGCCATCCGGAGGACCACCATCGTCTTTGAACT
CGCGGGTGCGGTCGGAGCCGCCTGGACCGAGGACGACGGTGACGCCGGAGAGATCGGGACCGACTTTCTGATGCGCCAGG
TCGCAACCATCGCCGGTGGAACGACGGAGATGGCCCGGAACGTGATTAGTGAACGCGTCCTAGGAATGCCGCGCGAGCGC
ACTGTCGACCGCGAACTCCCCTTCCGGGACGTGCCTCGATCGAAGCGATAG

Upstream 100 bases:

>100_bases
CGACGCCGAATGGGCCCGCGCCCTTGAACGCATGCCCGAGAAGACCCGGGCCATGTTCCGAACCCACTGATCTGACGCCA
CGACCCCAGGAGACCGATTC

Downstream 100 bases:

>100_bases
ACGCCGCCCCCGCAGTGCTTTCCTCCGAGGTGCACGTCAGGGGAAAGTCGAGCCACTGTCGCGCAGCAGCCGGCAGAGAG
TCCCTGAGAACGAGATGTGG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSPTATESLDGFRDRARKFIRANLEPAAPSVATSLRGGRSDEEELAAVTRDRELQRLLFDAGLAGICFPREYGGQGLTPA
HQAVLNDELGGYEYPSHLQSPSISQCGPVLLEFGTEEQKREHIPALLRGDEIWMQFLSEPGSGSDVAAALTSAVRDGDDW
VLNGSKIWTTGAWWSDWALCLARSNWDVPKHRGLTVFMVPIRHPGIKVHRIELLSGSQEFCQEFMTDVRIPDAYRIGEVD
GGWTVGVRWMFHERLGTSSPLVTLSGGSHLGRSTDPVAVARATGRLDDPTARDLIGEARTLELVGGALSSRLASAISGGQ
MSDQAAAIGRLFSGVAAIRRTTIVFELAGAVGAAWTEDDGDAGEIGTDFLMRQVATIAGGTTEMARNVISERVLGMPRER
TVDRELPFRDVPRSKR

Sequences:

>Translated_416_residues
MSPTATESLDGFRDRARKFIRANLEPAAPSVATSLRGGRSDEEELAAVTRDRELQRLLFDAGLAGICFPREYGGQGLTPA
HQAVLNDELGGYEYPSHLQSPSISQCGPVLLEFGTEEQKREHIPALLRGDEIWMQFLSEPGSGSDVAAALTSAVRDGDDW
VLNGSKIWTTGAWWSDWALCLARSNWDVPKHRGLTVFMVPIRHPGIKVHRIELLSGSQEFCQEFMTDVRIPDAYRIGEVD
GGWTVGVRWMFHERLGTSSPLVTLSGGSHLGRSTDPVAVARATGRLDDPTARDLIGEARTLELVGGALSSRLASAISGGQ
MSDQAAAIGRLFSGVAAIRRTTIVFELAGAVGAAWTEDDGDAGEIGTDFLMRQVATIAGGTTEMARNVISERVLGMPRER
TVDRELPFRDVPRSKR
>Mature_415_residues
SPTATESLDGFRDRARKFIRANLEPAAPSVATSLRGGRSDEEELAAVTRDRELQRLLFDAGLAGICFPREYGGQGLTPAH
QAVLNDELGGYEYPSHLQSPSISQCGPVLLEFGTEEQKREHIPALLRGDEIWMQFLSEPGSGSDVAAALTSAVRDGDDWV
LNGSKIWTTGAWWSDWALCLARSNWDVPKHRGLTVFMVPIRHPGIKVHRIELLSGSQEFCQEFMTDVRIPDAYRIGEVDG
GWTVGVRWMFHERLGTSSPLVTLSGGSHLGRSTDPVAVARATGRLDDPTARDLIGEARTLELVGGALSSRLASAISGGQM
SDQAAAIGRLFSGVAAIRRTTIVFELAGAVGAAWTEDDGDAGEIGTDFLMRQVATIAGGTTEMARNVISERVLGMPRERT
VDRELPFRDVPRSKR

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=247, Percent_Identity=31.5789473684211, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI226958412, Length=253, Percent_Identity=29.2490118577075, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI4501857, Length=397, Percent_Identity=23.9294710327456, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI7656849, Length=251, Percent_Identity=29.0836653386454, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI187960098, Length=398, Percent_Identity=25.1256281407035, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI4557231, Length=398, Percent_Identity=25.1256281407035, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI226958414, Length=213, Percent_Identity=30.0469483568075, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI4501859, Length=345, Percent_Identity=25.2173913043478, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI76496475, Length=357, Percent_Identity=24.6498599439776, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI4557235, Length=351, Percent_Identity=25.0712250712251, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI21361497, Length=223, Percent_Identity=28.2511210762332, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI211971008, Length=207, Percent_Identity=26.5700483091787, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI48976061, Length=207, Percent_Identity=26.5700483091787, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=214, Percent_Identity=30.3738317757009, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786223, Length=306, Percent_Identity=25.4901960784314, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508101, Length=351, Percent_Identity=28.4900284900285, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17505929, Length=208, Percent_Identity=31.25, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=354, Percent_Identity=27.9661016949153, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=213, Percent_Identity=30.9859154929577, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=214, Percent_Identity=29.4392523364486, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=208, Percent_Identity=30.2884615384615, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=203, Percent_Identity=31.5270935960591, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=227, Percent_Identity=30.3964757709251, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=208, Percent_Identity=28.8461538461538, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538396, Length=365, Percent_Identity=26.8493150684932, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=339, Percent_Identity=25.0737463126844, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=204, Percent_Identity=24.5098039215686, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=224, Percent_Identity=31.25, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646207, Length=397, Percent_Identity=25.6926952141058, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24666513, Length=223, Percent_Identity=29.1479820627803, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24660351, Length=406, Percent_Identity=28.0788177339901, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21355753, Length=301, Percent_Identity=27.906976744186, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281363737, Length=233, Percent_Identity=29.1845493562232, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 45167; Mature: 45036

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTATESLDGFRDRARKFIRANLEPAAPSVATSLRGGRSDEEELAAVTRDRELQRLLFD
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AGLAGICFPREYGGQGLTPAHQAVLNDELGGYEYPSHLQSPSISQCGPVLLEFGTEEQKR
CCCCCEECCHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCHHCCHHHHHCCCCHHHH
EHIPALLRGDEIWMQFLSEPGSGSDVAAALTSAVRDGDDWVLNGSKIWTTGAWWSDWALC
HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCEEEECCCCHHHHHHH
LARSNWDVPKHRGLTVFMVPIRHPGIKVHRIELLSGSQEFCQEFMTDVRIPDAYRIGEVD
HHCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCC
GGWTVGVRWMFHERLGTSSPLVTLSGGSHLGRSTDPVAVARATGRLDDPTARDLIGEART
CCEEEEEEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCEEHHCCCCCCCHHHHHHCCHHH
LELVGGALSSRLASAISGGQMSDQAAAIGRLFSGVAAIRRTTIVFELAGAVGAAWTEDDG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCC
DAGEIGTDFLMRQVATIAGGTTEMARNVISERVLGMPRERTVDRELPFRDVPRSKR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPTATESLDGFRDRARKFIRANLEPAAPSVATSLRGGRSDEEELAAVTRDRELQRLLFD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AGLAGICFPREYGGQGLTPAHQAVLNDELGGYEYPSHLQSPSISQCGPVLLEFGTEEQKR
CCCCCEECCHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCCCCCHHCCHHHHHCCCCHHHH
EHIPALLRGDEIWMQFLSEPGSGSDVAAALTSAVRDGDDWVLNGSKIWTTGAWWSDWALC
HCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCEEEECCCCHHHHHHH
LARSNWDVPKHRGLTVFMVPIRHPGIKVHRIELLSGSQEFCQEFMTDVRIPDAYRIGEVD
HHCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCEEECCCC
GGWTVGVRWMFHERLGTSSPLVTLSGGSHLGRSTDPVAVARATGRLDDPTARDLIGEART
CCEEEEEEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCEEHHCCCCCCCHHHHHHCCHHH
LELVGGALSSRLASAISGGQMSDQAAAIGRLFSGVAAIRRTTIVFELAGAVGAAWTEDDG
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCC
DAGEIGTDFLMRQVATIAGGTTEMARNVISERVLGMPRERTVDRELPFRDVPRSKR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]