| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314648
Identifier: 158314648
GI number: 158314648
Start: 3345092
End: 3346030
Strand: Direct
Name: 158314648
Synonym: Franean1_2827
Alternate gene names: NA
Gene position: 3345092-3346030 (Clockwise)
Preceding gene: 158314647
Following gene: 158314668
Centisome position: 37.24
GC content: 70.18
Gene sequence:
>939_bases ATGGCACCTTCCTCGACGCCTGCGCTGCTGGCCGACGACCTGCGTAGATGTCTTGTGGTCGACGGTCCGGAGCGCGTCGA GGGTCTGCACCGCCTCAGTCTTCGCCCGTTGGCGGGTGGCCGGAACAACCACGTCTTCGCCTGGCGAGACCCGCAGGGCG AGGAGGTGTGTGTGAAGGCGTACCGGGTTGATGATCGACAGCGGGCGGAGCGGGAATGGCGCGCGCTCTCCTTGCTGGCG AGGCATGGTGTGCCGAACGTGCCGCGACCGTTGTGGCGGGATCAGCAGGAGGCCCGGCCTGTCGTCGCGATGACCATGCT GCCAGGTGCGAGCGTCCCTGACCTGGCTGAGCCGGCGGCGCGGGAGGCGGCCCTGGTGGGGCTGGCCGTGACGCTGCGAC CGATCCACGACGTCCCGTGGGAGAACGGCTTCGCGAGGCTGCCCCGCGTCGACTCCGCGGCGCACTACGTGGCGAGGCTG ACCGAGGTGTGGCCTGGTCAGCTCGGCACGCGGCCGGATGACCCGCTGACGCGGGACCTGCGACTGCTGCTGGGGCTGTG GCGGGACAACGGGGACGCGGAGATGCTCGCCCGCCCCGTGGCACGGATCTTCTCGCGGGGTGACGGGAACCTGGTGAACT GGCTGTGGGATGGCGAGGTCGCGCGCTGTGTCGACTTCGAGTTCTGCGGGTGGAGCGATCTGGCGTTCGACGCCGCCGAT CTCGTCGAGCACATCAGCGCCCGTGAGGTCGACGATCGGGTCTGGTCGGCCGTGGTCACGGCGCTCGGGGTCGCAGGTGA GCTGATGCCGAGGTTCCGCGCGGCGCAGCGGACGTGTGCGTTGCGGTGGCTGGCGGTGCTGTGGAAGCAGCGGGAACGGC GGGTCGGGGAGTTCTCCGCCCAGCTGGACCGTGTTCGGGTCCTGTTTCGCGACCAGTGA
Upstream 100 bases:
>100_bases CCGCAGGGCATCCGCAGGGGGTTGAGCCCGTGTGTGGCGGGTGACCCTCGCCCCGTAGGCTTCGTGTGTTGTGAAGCCGT CACTGTCTGATGCGCCGACG
Downstream 100 bases:
>100_bases GGTGGTGGCGCGCTTATCTGGGCGCGGCGTGAGAGGTGACGCCGAGTCGGTCGAGGCAGCGCGCGACGACGGTCGCCAGC TCGGTGTCCGTGGCCAGGAC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MAPSSTPALLADDLRRCLVVDGPERVEGLHRLSLRPLAGGRNNHVFAWRDPQGEEVCVKAYRVDDRQRAEREWRALSLLA RHGVPNVPRPLWRDQQEARPVVAMTMLPGASVPDLAEPAAREAALVGLAVTLRPIHDVPWENGFARLPRVDSAAHYVARL TEVWPGQLGTRPDDPLTRDLRLLLGLWRDNGDAEMLARPVARIFSRGDGNLVNWLWDGEVARCVDFEFCGWSDLAFDAAD LVEHISAREVDDRVWSAVVTALGVAGELMPRFRAAQRTCALRWLAVLWKQRERRVGEFSAQLDRVRVLFRDQ
Sequences:
>Translated_312_residues MAPSSTPALLADDLRRCLVVDGPERVEGLHRLSLRPLAGGRNNHVFAWRDPQGEEVCVKAYRVDDRQRAEREWRALSLLA RHGVPNVPRPLWRDQQEARPVVAMTMLPGASVPDLAEPAAREAALVGLAVTLRPIHDVPWENGFARLPRVDSAAHYVARL TEVWPGQLGTRPDDPLTRDLRLLLGLWRDNGDAEMLARPVARIFSRGDGNLVNWLWDGEVARCVDFEFCGWSDLAFDAAD LVEHISAREVDDRVWSAVVTALGVAGELMPRFRAAQRTCALRWLAVLWKQRERRVGEFSAQLDRVRVLFRDQ >Mature_311_residues APSSTPALLADDLRRCLVVDGPERVEGLHRLSLRPLAGGRNNHVFAWRDPQGEEVCVKAYRVDDRQRAEREWRALSLLAR HGVPNVPRPLWRDQQEARPVVAMTMLPGASVPDLAEPAAREAALVGLAVTLRPIHDVPWENGFARLPRVDSAAHYVARLT EVWPGQLGTRPDDPLTRDLRLLLGLWRDNGDAEMLARPVARIFSRGDGNLVNWLWDGEVARCVDFEFCGWSDLAFDAADL VEHISAREVDDRVWSAVVTALGVAGELMPRFRAAQRTCALRWLAVLWKQRERRVGEFSAQLDRVRVLFRDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35204; Mature: 35072
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSSTPALLADDLRRCLVVDGPERVEGLHRLSLRPLAGGRNNHVFAWRDPQGEEVCVKA CCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHH YRVDDRQRAEREWRALSLLARHGVPNVPRPLWRDQQEARPVVAMTMLPGASVPDLAEPAA HCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHCCCEEEEEECCCCCCCCCCCHHH REAALVGLAVTLRPIHDVPWENGFARLPRVDSAAHYVARLTEVWPGQLGTRPDDPLTRDL HHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RLLLGLWRDNGDAEMLARPVARIFSRGDGNLVNWLWDGEVARCVDFEFCGWSDLAFDAAD HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEHHEECCCCCCCHHHCCHHH LVEHISAREVDDRVWSAVVTALGVAGELMPRFRAAQRTCALRWLAVLWKQRERRVGEFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDRVRVLFRDQ HHHHHHHHHCCC >Mature Secondary Structure APSSTPALLADDLRRCLVVDGPERVEGLHRLSLRPLAGGRNNHVFAWRDPQGEEVCVKA CCCCCCHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHH YRVDDRQRAEREWRALSLLARHGVPNVPRPLWRDQQEARPVVAMTMLPGASVPDLAEPAA HCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHCCCEEEEEECCCCCCCCCCCHHH REAALVGLAVTLRPIHDVPWENGFARLPRVDSAAHYVARLTEVWPGQLGTRPDDPLTRDL HHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH RLLLGLWRDNGDAEMLARPVARIFSRGDGNLVNWLWDGEVARCVDFEFCGWSDLAFDAAD HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEHHEECCCCCCCHHHCCHHH LVEHISAREVDDRVWSAVVTALGVAGELMPRFRAAQRTCALRWLAVLWKQRERRVGEFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLDRVRVLFRDQ HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA