Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314636

Identifier: 158314636

GI number: 158314636

Start: 3331236

End: 3333365

Strand: Direct

Name: 158314636

Synonym: Franean1_2815

Alternate gene names: NA

Gene position: 3331236-3333365 (Clockwise)

Preceding gene: 158314635

Following gene: 158314637

Centisome position: 37.09

GC content: 72.25

Gene sequence:

>2130_bases
ATGACCACCGCGGCGCACCCGCAGGCGCACCCCCAGGATGCCGTCGGCTGGCCGGACGACGACACGATCGTGCTGGCCGG
CCGGCCAGTGCGCCCCAGCACCGACGAGACGCTGCTGTCCCGGTTCGGTGACCTGGTCTGGCAGCTGAGCCCGGCACATC
CCGACGCCCACATCACCGTCGCCGCGCTGGACTGGCGGCGCTACCCGCCCCAGCTCGTCCGGCCGTTCAAGACGTTCTTC
CACACCGCACTGGAGCAGCCCTACCCGGCGTCGCCGAACGTGCAGCGGCCCGGCGAGCGGCCCAGCGTCGCCACGCTCAG
CTACTGGTTCGTCGACCTGCTCGTCTTCGCCACCTGGCTCGACGAACGCGCCGTCGGCCACCTCAGCGACATCACCACCG
CCGACCTAGACGCCTACCGGTCCCACGTCCTCGGGCTGGGCCGAAGCCCCGCCCGCGAGACGGACCTCCTCGCCGCCGTC
CGCACCCTGTGGATCTACCGTGACCGTCTTCCGGCGGCGTGCCGGCTTCGGGTCTGCCCGTGGGGCGGCCTGGCGGCCAA
GGACCTGGTCCGCCTCCCACCCGCCGGCCGGGAGAACGCCACCCCCCGGATCGCCTCCGCGACGATGGACGCCCTGCTCG
CCTGGGCGCTACGCATGGTCGAAACCCTCGGCCCGGACATCCGCGACGCCTGGCACGAGTTCCACGACCTCGACGCGGGC
AACCACCCCTCCCAGCAGATCTACCAGGGGATGGGCATCCCCGACCGCCTGCACCTGTTCCTCCACCACGCCAGCAGACG
CGGAACCTTGCTGCCCGGACGGCACGACCCCGCCCGCGGCACCGCCGTCAACGGCAGTCACATCCTGCGCCTGGTCGGGG
TCCCCCCGGACAAGCGCGCCGGGCTGCCCTCACGGCAGCGGGCGCTGCTGGAGAACGCGGGCGTACCGATCAGCACCGAC
ACCACCGTCGGCAGGATCACCGCACGCCTCGACGGCATCCCCTGGCGGCCCGGCCCGATCAGCATCCGCGAGCTCCCCAC
CCTGGTGCGGCTGCTCTATGCTTCCGCCTTCACCGTCATCTGCTATCTATCGGGCATGCGCCCCGGCGAGGTCCTCACCC
TGCCCCACGGCTGCGCCGGCAGCGACCCCCGCACCGACGAGCTGCTGCTGCACGGCCGGCGGGGCAAGGGCTACGACCGA
AGCCCCCTGACCCCCGGGCAGGTCGAACCCGACCGACCCTGGGTAGTCGTCGCCCCGGTCCACACCGCCGTGCGGATGCT
GGAAAGCCTCGCCGACTTCCCGTTCCTGTTCCCCGCCAGCCCGATCGCCGCCCACGCCGGCCGGGCCAACACCACCCACG
CCCGCTCCACCGCCGCGATCAACCAGGACCTGGAAGACCTCGTCACCTGGGTCAACACGACCTTCACCCGCCCGGACGGC
ACCCCGCCCATTCCACCCGACCCGACCAAGCACCTCCACGCCACCCGCTTCCGGCGCACCCTCGCCCACAGCATCGTCCG
CCGTCCCCGCGGCCTCATCGCCGCCGCCCTGCAATACGGACACGTCCGCGCCAAGGTCACCCTGAGCTACGCGGGCGCCG
CGGACACCTCCTGGCTCGATGACCTGGCGGTCGAGCGCCTGGAGATGGTCATGGAACAGACGCAGACCGATGCCCGGCTC
CTCGCCGACGGCGAGCACGTCAGCGGACCCGCCGCCACCGACTACCGCACCCGGATCGCTCGGTTCCACGGCCGAGTCGT
CAACCAGCCCCACAACGCCCGACGGCTCCTCGCCAGCACGGACCCAGACATCCACCACGGCGACGGCCTCACCTGCGTCT
ACCGCGCCGAGACCGCCGAATGCCGCCGCATCCTCGCCCGACAGGGGATCACCGTCGACGGGCCGCAAGAGTCCCACTGC
CGGTCGACCTGCCGCAACCTCGCCTACACCGACCGCAGCATTGACCAGCTGCGCTCCCGGCTCGATCTCCTGGTCGCCAC
CACCGGCGACTCCCTGACGCCCCAGCCGCTCCGCGACCGAGCGCACGCACAGGCCCAGGCCGCCAGAGCCACCATCGACC
GGCACGTCTCATCCTCCCCACATCGGGCAGACCAGGCAGGCCAGCGATGA

Upstream 100 bases:

>100_bases
ACCACTACACTGCGGCCGAACGCGACCACGCCCGCGCCACCGTGACCGCCCGCCAGCAGCAGCTCGTAGACGACCTGCTC
GACGGCCGATGGGACCTGCG

Downstream 100 bases:

>100_bases
CCCGCCAGCCCCGGAATCTGCCAGCGGAGAGGTCCGCCATCGAGGCCGCGACCACGCGGCTGCTCGCCGGAACCCCACTG
CGATCCCGCTCCGGCAAACT

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Domain-Containing Protein; Phage Integrase; Phage Integrase Family Domain Protein; Orf_Bo; Integrase Family Protein

Number of amino acids: Translated: 709; Mature: 708

Protein sequence:

>709_residues
MTTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITVAALDWRRYPPQLVRPFKTFF
HTALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWLDERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAV
RTLWIYRDRLPAACRLRVCPWGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAG
NHPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRAGLPSRQRALLENAGVPISTD
TTVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVICYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDR
SPLTPGQVEPDRPWVVVAPVHTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDG
TPPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLDDLAVERLEMVMEQTQTDARL
LADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLASTDPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHC
RSTCRNLAYTDRSIDQLRSRLDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR

Sequences:

>Translated_709_residues
MTTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITVAALDWRRYPPQLVRPFKTFF
HTALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWLDERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAV
RTLWIYRDRLPAACRLRVCPWGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAG
NHPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRAGLPSRQRALLENAGVPISTD
TTVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVICYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDR
SPLTPGQVEPDRPWVVVAPVHTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDG
TPPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLDDLAVERLEMVMEQTQTDARL
LADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLASTDPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHC
RSTCRNLAYTDRSIDQLRSRLDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR
>Mature_708_residues
TTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITVAALDWRRYPPQLVRPFKTFFH
TALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWLDERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAVR
TLWIYRDRLPAACRLRVCPWGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAGN
HPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRAGLPSRQRALLENAGVPISTDT
TVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVICYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDRS
PLTPGQVEPDRPWVVVAPVHTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDGT
PPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLDDLAVERLEMVMEQTQTDARLL
ADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLASTDPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHCR
STCRNLAYTDRSIDQLRSRLDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78195; Mature: 78063

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITV
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCCCEEEE
AALDWRRYPPQLVRPFKTFFHTALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWL
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAVRTLWIYRDRLPAACRLRVCP
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECC
WGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAG
CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
NHPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRA
CCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCC
GLPSRQRALLENAGVPISTDTTVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVI
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
CYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDRSPLTPGQVEPDRPWVVVAPV
HHHCCCCCCCEEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEECH
HTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDG
HHHHHHHHHHHCCCEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCC
TPPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLD
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCCCCCHHHH
DLAVERLEMVMEQTQTDARLLADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLAST
HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC
DPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHCRSTCRNLAYTDRSIDQLRSR
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
LDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR
HHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure 
TTAAHPQAHPQDAVGWPDDDTIVLAGRPVRPSTDETLLSRFGDLVWQLSPAHPDAHITV
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEECCCCCCCEEEE
AALDWRRYPPQLVRPFKTFFHTALEQPYPASPNVQRPGERPSVATLSYWFVDLLVFATWL
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DERAVGHLSDITTADLDAYRSHVLGLGRSPARETDLLAAVRTLWIYRDRLPAACRLRVCP
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECC
WGGLAAKDLVRLPPAGRENATPRIASATMDALLAWALRMVETLGPDIRDAWHEFHDLDAG
CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
NHPSQQIYQGMGIPDRLHLFLHHASRRGTLLPGRHDPARGTAVNGSHILRLVGVPPDKRA
CCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCCCCC
GLPSRQRALLENAGVPISTDTTVGRITARLDGIPWRPGPISIRELPTLVRLLYASAFTVI
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
CYLSGMRPGEVLTLPHGCAGSDPRTDELLLHGRRGKGYDRSPLTPGQVEPDRPWVVVAPV
HHHCCCCCCCEEECCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEECH
HTAVRMLESLADFPFLFPASPIAAHAGRANTTHARSTAAINQDLEDLVTWVNTTFTRPDG
HHHHHHHHHHHCCCEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECCCC
TPPIPPDPTKHLHATRFRRTLAHSIVRRPRGLIAAALQYGHVRAKVTLSYAGAADTSWLD
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCCCCCHHHH
DLAVERLEMVMEQTQTDARLLADGEHVSGPAATDYRTRIARFHGRVVNQPHNARRLLAST
HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC
DPDIHHGDGLTCVYRAETAECRRILARQGITVDGPQESHCRSTCRNLAYTDRSIDQLRSR
CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
LDLLVATTGDSLTPQPLRDRAHAQAQAARATIDRHVSSSPHRADQAGQR
HHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA