Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314623

Identifier: 158314623

GI number: 158314623

Start: 3316962

End: 3318575

Strand: Direct

Name: 158314623

Synonym: Franean1_2802

Alternate gene names: NA

Gene position: 3316962-3318575 (Clockwise)

Preceding gene: 158314622

Following gene: 158314624

Centisome position: 36.93

GC content: 67.91

Gene sequence:

>1614_bases
ATGAACAAGCCCAGCCAAAGGGTTGAGCAGGACGAGTTGCGGACTCGGATGCGCGCGACCGGCATGAGCCACCACGAGAT
CGCGATCGAGTTCGCCCGCCGCTACCGGCTACGCCCCCGCGCTGCCTACCGTGTCGCCCACGGCTGGACACAGCAGCAGG
CCGCCGACCGCATCAACGCCCACGCCGTCCGTGCCGGCCTCGACCCGGACGGCACCGCCCCGATGACCGCGCCGCGGCTA
TCGGAGGTGGAGAACTGGCCTCGCCCTGCCCGGCGACGTCCCACCCCGCAGATCCTCGCCCTGCTTGCCGAGGTGTACGG
ATGCGATCTCCACGCCCTCGTCGACGTGGACGATCGCGAACACCTCCCTCCGGCAGACGTGTTCCTGATCAACGGCATGC
GCCGGCTGCCGGACGGCGTGGCTGCGTCATCGACGGCCTCTCCGATCACACTCGCGGGGAAACGATGGGGAACGACCACC
GAACGACCGGTTGACGTCGCCTTCGGCGCCGCCAGAGCTGGGCAAGCACCGGCCCCCAACTCGGTCGGTCTCGCAGACAA
AGACAACGTGATCATTTTTCCGCAACTCGCCCCGGATGGGAGGATCGTCCTCATGCCACTCGATCGCCGGGGTTTCCTGA
GCGGCCTGGGCCTCACCGCCGCCAGCAGCGCAGCCCTCAGCCCGCTCGCCACGATGCCACCAGGATCGTCCTCCATCGAC
CCACGTGTCGTCGATCACTTCGCACGCCTGCGGGCCGTGCTCGCGGAGAACGACAACCTCTTCGGGCCGCGCCAGGTCAT
CACCACAGCGCAGGAACAGGCCGGCCTCATCGCCGCCCATCTCCGCCACGGCACGAGTTCGCGTCCACAACGGCAGACCC
TGCTCCACATCCAAACGCAGTTCGCTGATCTCCTCGGCTGGCTCCATCAAGACAGCGGCGATAACGCCACCGCTGGATAC
TGGCTCGACCGAGCGCTGGAATGGTCACACCGAGCGAGCGACCCCAACGCCACCGTGTTCATCCTTGCCCGCAAAAGCCA
ACTCGCCGCAGACCGTGGCGACCCAGCTGAAGCCGTCGACGTCGCCGACGCAGCCCTGACCAGCGCGGAGCCAACCGGTC
GTCTCGCCGCCATCGCCGCGACCTACAGCGCGCATGGCCACGCACTACGCGGCGAGAAAACCACCTGCCTGACGCTCTAC
GACCGCGCCCACGACATCCTCGACCAGGCCGGACCCGACACCGACCCCTGGGGCGAGTTCTTCAGCCCTGCCTACATCGA
AGTCCAGCGGGCACACAGCCTCGCCGCACTCGGTGACTACCCTGCTGCAGCCACCGGGTTCCGGACCGCGATCGACGGTC
TCCCCTCGGCTTTCCACCGCGACCGCGGTGTCTACCTCGCCCGCGAAGCCCTCGCACACGCAGGAGCACGCGAACCAGAG
CAAGCCGCGACACTCGGTCTCAACGCACTCACGGTCGGCGCCAGCACGCACTCCGGATGCATCATGACCAGTCTGCGGTC
CCTGCGTGACGCCGTCGCCGGATGGCAAACTGTCTCCCAGGTACGCGAGTTCCGCCAGGCGATGGACCAGGTCCCCACGG
CCATCACCGTCTGA

Upstream 100 bases:

>100_bases
GGACCGGTTACTGTGGGCGGGTTCCGATCGGGAAGTGATCGGTGGCGGTAGCTGCCGGATCAGTGGGCATCCTTGACCTG
GAAGGGGTGGCAACGTCGCC

Downstream 100 bases:

>100_bases
CTACCATCCCGCCACCGGCTATCCGGTCCGCCACCACCAGGGACCGGCCCAGGGAAGGACGAGCCGCTCCATGCCCCAGC
TCGACGACCACCATTGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINAHAVRAGLDPDGTAPMTAPRL
SEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDREHLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTT
ERPVDVAFGAARAGQAPAPNSVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID
PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQFADLLGWLHQDSGDNATAGY
WLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVDVADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLY
DRAHDILDQAGPDTDPWGEFFSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE
QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV

Sequences:

>Translated_537_residues
MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINAHAVRAGLDPDGTAPMTAPRL
SEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDREHLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTT
ERPVDVAFGAARAGQAPAPNSVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID
PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQFADLLGWLHQDSGDNATAGY
WLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVDVADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLY
DRAHDILDQAGPDTDPWGEFFSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE
QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV
>Mature_537_residues
MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINAHAVRAGLDPDGTAPMTAPRL
SEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDREHLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTT
ERPVDVAFGAARAGQAPAPNSVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID
PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQFADLLGWLHQDSGDNATAGY
WLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVDVADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLY
DRAHDILDQAGPDTDPWGEFFSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE
QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57909; Mature: 57909

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
HAVRAGLDPDGTAPMTAPRLSEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDRE
HHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC
HLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTTERPVDVAFGAARAGQAPAPN
CCCCHHEEEECCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCC
SVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID
CCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHCCHHHHCHHHCCCCCCCCCCCCCCC
PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FADLLGWLHQDSGDNATAGYWLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVD
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCCCCHHHHH
VADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLYDRAHDILDQAGPDTDPWGEF
HHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCCHHHH
FSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE
CCCHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCCH
QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV
HHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MNKPSQRVEQDELRTRMRATGMSHHEIAIEFARRYRLRPRAAYRVAHGWTQQQAADRINA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
HAVRAGLDPDGTAPMTAPRLSEVENWPRPARRRPTPQILALLAEVYGCDLHALVDVDDRE
HHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCC
HLPPADVFLINGMRRLPDGVAASSTASPITLAGKRWGTTTERPVDVAFGAARAGQAPAPN
CCCCHHEEEECCHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCC
SVGLADKDNVIIFPQLAPDGRIVLMPLDRRGFLSGLGLTAASSAALSPLATMPPGSSSID
CCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHCCHHHHCHHHCCCCCCCCCCCCCCC
PRVVDHFARLRAVLAENDNLFGPRQVITTAQEQAGLIAAHLRHGTSSRPQRQTLLHIQTQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FADLLGWLHQDSGDNATAGYWLDRALEWSHRASDPNATVFILARKSQLAADRGDPAEAVD
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHCCCCCCHHHHH
VADAALTSAEPTGRLAAIAATYSAHGHALRGEKTTCLTLYDRAHDILDQAGPDTDPWGEF
HHHHHHCCCCCCCCEEEEEEECCCCCCEECCCCCEEEEEHHHHHHHHHHCCCCCCCHHHH
FSPAYIEVQRAHSLAALGDYPAAATGFRTAIDGLPSAFHRDRGVYLAREALAHAGAREPE
CCCHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCCH
QAATLGLNALTVGASTHSGCIMTSLRSLRDAVAGWQTVSQVREFRQAMDQVPTAITV
HHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA