| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314598
Identifier: 158314598
GI number: 158314598
Start: 3284083
End: 3284967
Strand: Direct
Name: 158314598
Synonym: Franean1_2777
Alternate gene names: NA
Gene position: 3284083-3284967 (Clockwise)
Preceding gene: 158314592
Following gene: 158314599
Centisome position: 36.56
GC content: 70.51
Gene sequence:
>885_bases GTGGACGTGCCGGCCCAGAGCAAGGACATCGCGGTCACCCTGGTCACCTTGATCATGGCGCTGGTTGTCGGGTTGACGTT CTTGTTCGGCTTCGGCAATGTCCTCCAACTCGGGCTTCGGTTGGGGGTGCCGATCTGGATCGCGCCGCTGGTGGCCCCGG CCGTCGATCTTTCTGTGGTGGGGCTTTTGCTCGGGACGCGGCAGTTGGCGTTGCGGGGCGCTCCCATCGAACTTCTGCGT CCGGCCCGGCGGCTGCTGGTGTTCTCCAGCATTGTCACTCTGGCGCTCAATATCGCCGAGCCGGTGATCGCGGGTGACTA CGCGAAGGCCGCGTTCGACAGCGTCGGTCCGCTTTTGTTGATCGGCTGGAGTGAGGTCGGCCCAGGATTGCTGCAGGCCA TGCGCCACCCGCCCGCATGCCCCCAGAATCCCTCGAATCCGCCGGCTGGTGTGGACGCCACGCCGCCGGCACCAACCACC GACGGCGGCAGCACCATCCCGCCGCCGGCGTCGCCGGAGGTTCCTCGGCAGCGTCGGCCCGCCACGGCTTCGGGTGGGCT GTCCGATGAGGAGTGGCTGGCGTGGGCGCGGCGCGAGGATGCCCTGTACTGGGAGGAGAACCACCGGCCGATCTCCTCGG ACGAGCTGCGTAAGCGACTGCACGTGGGGTCGAAGCGGGCCCGGAGCCTGGTCACGCGGCTACGCGCCGACGCCCGCCGC GTCCTCGACGAACACGGCCCGGCCGGTGCCCCCGCGGCGGGCGACCTCCTCCTGTCCAGCCGCCCCGACAGCGACGGGGA CGGGGACGGGGATGGTGTGGAGCTGGTCGAGATCGGGCCGGCGGAGCCGGCCGACCCGCCGGGTGTACTCGCCGCGGTCG GATGA
Upstream 100 bases:
>100_bases AAGGTCCTGAGATCGTCGTTCGTCCGGTAGGGACACGTGTCCTGACCAGGGATGACGCATGATGGCCCCGGACAGCACCA GCCCGGCCGGTGCTTCGGCC
Downstream 100 bases:
>100_bases CGACCCCCGCCCGTGCGGGCGGGGCCAGCGTGCACCGGCGGTCCGCGCCGGGCCGGCAGATGCCGGCGCGGTCACCCCCG CCCTGCGGAGCGCTGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVVGLLLGTRQLALRGAPIELLR PARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLLIGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTT DGGSTIPPPASPEVPRQRRPATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG
Sequences:
>Translated_294_residues MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVVGLLLGTRQLALRGAPIELLR PARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLLIGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTT DGGSTIPPPASPEVPRQRRPATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG >Mature_294_residues MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVVGLLLGTRQLALRGAPIELLR PARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLLIGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTT DGGSTIPPPASPEVPRQRRPATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30774; Mature: 30774
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GLLLGTRQLALRGAPIELLRPARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEE IGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTTDGGSTIPPPASPEVPRQRRP EECHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR CCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG HHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECC >Mature Secondary Structure MDVPAQSKDIAVTLVTLIMALVVGLTFLFGFGNVLQLGLRLGVPIWIAPLVAPAVDLSVV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GLLLGTRQLALRGAPIELLRPARRLLVFSSIVTLALNIAEPVIAGDYAKAAFDSVGPLLL HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEE IGWSEVGPGLLQAMRHPPACPQNPSNPPAGVDATPPAPTTDGGSTIPPPASPEVPRQRRP EECHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATASGGLSDEEWLAWARREDALYWEENHRPISSDELRKRLHVGSKRARSLVTRLRADARR CCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH VLDEHGPAGAPAAGDLLLSSRPDSDGDGDGDGVELVEIGPAEPADPPGVLAAVG HHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA