Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314475

Identifier: 158314475

GI number: 158314475

Start: 3133786

End: 3134613

Strand: Direct

Name: 158314475

Synonym: Franean1_2648

Alternate gene names: NA

Gene position: 3133786-3134613 (Clockwise)

Preceding gene: 158314472

Following gene: 158314476

Centisome position: 34.89

GC content: 65.46

Gene sequence:

>828_bases
ATGAGAGCGATCAGTATTCGATCGACGCGAGTCGTGGCCAACGCATCGACGCACCTGGCCGCTCGACGGTTCACGATGAT
TATCAAGGCCTTCATCAGTGTTGACGGCTCGGGTGGTGAGGTACCGCACTGGCCACCACGTCGGCGGTTTGTCGTTCGTC
CTCGGCGCCCGCGTGCCCGATGTCCCCTACGTCGTCAAAGCGTGGCGCGAACGCCACCCCGGCGCCGAAATCCCGGACGG
GCATGTGTTCGTCCAGCCGTGGCCCGCCGGCCCCAACCACACGGTCTTCTACCAGTAAAAGGCCGACCGGGCACGGCGCA
CCCTGCGCGGGATCGACCAGCAAGTCGCCAAAGCCGAGAACGCCGTCGCCGGGAAGACCCTGGTGAAACGGAACCGGTAC
GTGCGCCTCACCGGCGCCAGCAAGTTGGTCAACCGCACGCTGGAAGCCGAGAACCGCGACCTGGCAGGCATAAAGGGCTA
CGTCACCAACCTGCCAGACCTCGCGACGCCCAACAGGTCATCAGCACCTACAGCCGGCTGCTGAACGTCGAGAAGAGCTT
CCGGATGAGCAAGTCCGACCTCGCCGCCCGGCCCGTCTACCACCACAAACGCGAATCGATCGAAGCCCACCTGACCGTCG
TGTTCGCCGCCCTCGCCCTAAGCCGCTGGATGGAGAACACCACCGGTTGGCCCATCCGCAAGTTCGTTAGGACCGCCCGC
CGCTACCGCAGCATCACCATTCAGGCCGGCGAACACACCATCACCGCTGCCGACCCCCTGCCCGACGACCTACGAACCGC
CCTCGCCGCCGTCCACGGCACGCACTAA

Upstream 100 bases:

>100_bases
TGACATAGTCAGCACGTTTCCGGGGATCCTGGACGTATACGTGTCCTACCACCTCGACTCAGCAGAGTCGCTCTGGTGGG
AATGATGTCGATCGCCAGAC

Downstream 100 bases:

>100_bases
TTGGCCTAAGTCAGGATACAGCAACGAATCCTCAGCCGTCTCGCTGTGCGTGAGAACATGAAGGACGAGAATCTGTTGAG
GGTTCGCCGAGGCGTGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase IS4 Family; ISMsm6 Transposase; TnpB Family Transposase

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRAISIRSTRVVANASTHLAARRFTMIIKAFISVDGSGGEVPHWPPRRRFVVRPRRPRARCPLRRQSVARTPPRRRNPGR
ACVRPAVARRPQPHGLLPVKGRPGTAHPARDRPASRQSRERRRREDPGETEPVRAPHRRQQVGQPHAGSREPRPGRHKGL
RHQPARPRDAQQVISTYSRLLNVEKSFRMSKSDLAARPVYHHKRESIEAHLTVVFAALALSRWMENTTGWPIRKFVRTAR
RYRSITIQAGEHTITAADPLPDDLRTALAAVHGTH

Sequences:

>Translated_275_residues
MRAISIRSTRVVANASTHLAARRFTMIIKAFISVDGSGGEVPHWPPRRRFVVRPRRPRARCPLRRQSVARTPPRRRNPGR
ACVRPAVARRPQPHGLLPVKGRPGTAHPARDRPASRQSRERRRREDPGETEPVRAPHRRQQVGQPHAGSREPRPGRHKGL
RHQPARPRDAQQVISTYSRLLNVEKSFRMSKSDLAARPVYHHKRESIEAHLTVVFAALALSRWMENTTGWPIRKFVRTAR
RYRSITIQAGEHTITAADPLPDDLRTALAAVHGTH
>Mature_275_residues
MRAISIRSTRVVANASTHLAARRFTMIIKAFISVDGSGGEVPHWPPRRRFVVRPRRPRARCPLRRQSVARTPPRRRNPGR
ACVRPAVARRPQPHGLLPVKGRPGTAHPARDRPASRQSRERRRREDPGETEPVRAPHRRQQVGQPHAGSREPRPGRHKGL
RHQPARPRDAQQVISTYSRLLNVEKSFRMSKSDLAARPVYHHKRESIEAHLTVVFAALALSRWMENTTGWPIRKFVRTAR
RYRSITIQAGEHTITAADPLPDDLRTALAAVHGTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31287; Mature: 31287

Theoretical pI: Translated: 12.54; Mature: 12.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAISIRSTRVVANASTHLAARRFTMIIKAFISVDGSGGEVPHWPPRRRFVVRPRRPRAR
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC
CPLRRQSVARTPPRRRNPGRACVRPAVARRPQPHGLLPVKGRPGTAHPARDRPASRQSRE
CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHH
RRRREDPGETEPVRAPHRRQQVGQPHAGSREPRPGRHKGLRHQPARPRDAQQVISTYSRL
HHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHH
LNVEKSFRMSKSDLAARPVYHHKRESIEAHLTVVFAALALSRWMENTTGWPIRKFVRTAR
HHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RYRSITIQAGEHTITAADPLPDDLRTALAAVHGTH
HHHEEEEECCCEEEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAISIRSTRVVANASTHLAARRFTMIIKAFISVDGSGGEVPHWPPRRRFVVRPRRPRAR
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCC
CPLRRQSVARTPPRRRNPGRACVRPAVARRPQPHGLLPVKGRPGTAHPARDRPASRQSRE
CCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHH
RRRREDPGETEPVRAPHRRQQVGQPHAGSREPRPGRHKGLRHQPARPRDAQQVISTYSRL
HHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHH
LNVEKSFRMSKSDLAARPVYHHKRESIEAHLTVVFAALALSRWMENTTGWPIRKFVRTAR
HHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RYRSITIQAGEHTITAADPLPDDLRTALAAVHGTH
HHHEEEEECCCEEEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA