| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314414
Identifier: 158314414
GI number: 158314414
Start: 3064970
End: 3065419
Strand: Direct
Name: 158314414
Synonym: Franean1_2586
Alternate gene names: NA
Gene position: 3064970-3065419 (Clockwise)
Preceding gene: 158314412
Following gene: 158314417
Centisome position: 34.12
GC content: 69.11
Gene sequence:
>450_bases GTGACAGGGATTGACGATCTGTCTGGTCCTGATCGGCGCATTCTGCTGCACGATCTGCGGCGCACGCTGAGTCCCGGCTG GCTGCCGGACGTGCTGGTCGCGTTGTCGAGCGGGCCGCTGCCGTATACGGGCTTGTTGCGCACGCTGCGCAGCTATGAGG TTCCGCGGGGTCGGCGCTGGCCGCAGCCACTCATCCAGGAAGCCGTGTTGACCCGGACATTGCGGTGGATGCAGCGCCGG GGGCTGGTCGAGCGTGCACGGGAGCGCGTGTTCCCCTTCGGGACGGTCTACTGGTTGACACCGGCGGCGAAGGAGTTGGC GGATCTGGTCGTGCCGATGGCGCAGTGGGCGGCGGCGCATGAGGATCTGTTGGAGGTGGATCGGCGGGAGTGGGCCGAGC GGCGGCGCCGCAGGAACAGCGGCGGCAGCCGTCGACCGCGGTCAGGCTGA
Upstream 100 bases:
>100_bases AGAGGGGCTACGGGGGCGTCGGAGGCGGCGAGGCAGGCGCGCTGCGCGGCGGAACGGTCAAGCAGGCCCGGTGGTTCTGC GGATCTTCCGTGGGAGTGGT
Downstream 100 bases:
>100_bases ACGCGCGCCGGGCGGTCCAGGCCGCATCACGGCCTGGAAGACGCGATCGGTGTCGGCGGTGGGGTGCTCGCCGACCTCGG CGAGGGCCGCGACCAGCTGG
Product: HxlR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRWPQPLIQEAVLTRTLRWMQRR GLVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAHEDLLEVDRREWAERRRRRNSGGSRRPRSG
Sequences:
>Translated_149_residues MTGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRWPQPLIQEAVLTRTLRWMQRR GLVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAHEDLLEVDRREWAERRRRRNSGGSRRPRSG >Mature_148_residues TGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRWPQPLIQEAVLTRTLRWMQRRG LVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAHEDLLEVDRREWAERRRRRNSGGSRRPRSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17273; Mature: 17142
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: PS51118 HTH_HXLR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRW CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC PQPLIQEAVLTRTLRWMQRRGLVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH EDLLEVDRREWAERRRRRNSGGSRRPRSG HHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TGIDDLSGPDRRILLHDLRRTLSPGWLPDVLVALSSGPLPYTGLLRTLRSYEVPRGRRW CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC PQPLIQEAVLTRTLRWMQRRGLVERARERVFPFGTVYWLTPAAKELADLVVPMAQWAAAH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH EDLLEVDRREWAERRRRRNSGGSRRPRSG HHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA