| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314327
Identifier: 158314327
GI number: 158314327
Start: 2974671
End: 2974934
Strand: Direct
Name: 158314327
Synonym: Franean1_2497
Alternate gene names: NA
Gene position: 2974671-2974934 (Clockwise)
Preceding gene: 158314326
Following gene: 158314329
Centisome position: 33.12
GC content: 66.29
Gene sequence:
>264_bases ATGGCCGCTGGCGAAGATCCGCATCTGTCGTTGGTACGACTTGTCGAGCCCACCCCGCCGGACGGCTGCGGAGAGTGTCT GCGGGTCGGTTCGCAATGGGTGCACCTCAGGCTGTGTCTCACATGTGGCAATGTGGGGTGCTGCGACTCCTCTCCGTCGC GGCACGCCCGTGCCCATGCGCACACCCACGAGCACCCCATCGTCCGCTCGTACGAACCGGGCGAGGACTGGCGCTGGTGC TACGTCGACGAGGCCTACGTCTAG
Upstream 100 bases:
>100_bases CACGGGTTCTTCGCACGCCAGAATTTAGGACGTACTGAGATTTCGGGGCGGGACGGTGGCCTGCTTGGCAGCCCCTGTTC GGTCAATGGAGAATGGGTTC
Downstream 100 bases:
>100_bases CGGGCACGGCTGCCTAGCGGGCACGGCTGCTTGGTCGGGCCCCACCTCCGCCGGGCCCGCCCCCTGGAAGAGGAGCGGGC CCACCGACCCGGGTGGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Na+/H+ Antiporter; Zinc Finger Protein; Zinc Finger UBP-Type Protein; Zinc Finger Domain-Containing Protein-Containing Protein; Na(+)/H(+) Antiporter; Sodium/Hydrogen Exchanger; Zinc Finger UbP-Type Protein; Zinc Finger UBP-Type Domain Containing Protein; Na+ Antiporter
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MAAGEDPHLSLVRLVEPTPPDGCGECLRVGSQWVHLRLCLTCGNVGCCDSSPSRHARAHAHTHEHPIVRSYEPGEDWRWC YVDEAYV
Sequences:
>Translated_87_residues MAAGEDPHLSLVRLVEPTPPDGCGECLRVGSQWVHLRLCLTCGNVGCCDSSPSRHARAHAHTHEHPIVRSYEPGEDWRWC YVDEAYV >Mature_86_residues AAGEDPHLSLVRLVEPTPPDGCGECLRVGSQWVHLRLCLTCGNVGCCDSSPSRHARAHAHTHEHPIVRSYEPGEDWRWCY VDEAYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9724; Mature: 9593
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS50271 ZF_UBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 8.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGEDPHLSLVRLVEPTPPDGCGECLRVGSQWVHLRLCLTCGNVGCCDSSPSRHARAHA CCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC HTHEHPIVRSYEPGEDWRWCYVDEAYV CCCCCCCEECCCCCCCCEEEEEECCCC >Mature Secondary Structure AAGEDPHLSLVRLVEPTPPDGCGECLRVGSQWVHLRLCLTCGNVGCCDSSPSRHARAHA CCCCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCC HTHEHPIVRSYEPGEDWRWCYVDEAYV CCCCCCCEECCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA