BacMap

Definition	Frankia sp. EAN1pec chromosome, complete genome.
Accession	NC_009921
Length	8,982,042

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The map label for this gene is fabG [H]

Identifier: 158314225

GI number: 158314225

Start: 2849760

End: 2850497

Strand: Direct

Name: fabG [H]

Synonym: Franean1_2395

Alternate gene names: 158314225

Gene position: 2849760-2850497 (Clockwise)

Preceding gene: 158314224

Following gene: 158314226

Centisome position: 31.73

GC content: 72.36

Gene sequence:

>738_bases
ATGTTCCCAGACCTGGCCGGCAAGCGTGCCCTGGTCACCGGCGGCACGCGCGGTATCGGCCGGGCCGTCGTGCTCGGGCT
CGCCCAGGCCGGCGCCACCGTCGTGGTCGGCCACCAGCGCCAGACCGAGGACGCCGAGAGCCTGCGCCGCGAGCTCAAGG
ACACCGGCAACGATCACCTGCTGGTGCAGGCCGACGTCGCCGACCCGGCGCAGATCACCGAGCTGGTGTCGGCGACCGGC
ACCCACCTCGGCGGCCTCGACATCGTCGTGAACAGCGTCGGGACGATCAGCCACATCCCGTACGCCGACCTGCCGCTGGA
CGCCTGGACGCAGGTGCTGACCACCAACCTGACCGCGACCCACCTCGTCACCCAGGGTGCGCTGCCGCTGCTCGGCGACT
CCGGGACGGTCGTCAACATCGGGTCCGGCGCCGGGCTCGTCGGCGTGCCGCTGCGCGCCCACTACACGGCGGCCAAGACG
GGCCTGATCGGCCTCACCCGCTCGCTGTCCAAGGAGCTCGGCTCCAAGGGCATCCGGGTGAACCTGGTCTCGCCGGGCGT
CATCGAGACCGACCAGGCGGCCGGCATGCCCCCGGCGGCGCGCGCCGCGTACACCAACCGCATCCCGCTGGGCCGGCTCG
GCGAGGCCAACGAGGTCGCCGCCGTCGTCCTGTTCCTCGCCAGCGACGTGTCCAGCTACGTCAACGGCGCCACCTTCACG
GTCGACGGAGGAATCTGA

Upstream 100 bases:

>100_bases
TGCCTCTCCGGCGCGCCGACGACGCCGTCGGCGCGCCGGGGGATCCCGGGTGGCCAAGGCCACCGGAACGTTCCAGACTC
ACCTTTCGAGAGGATCACTG

Downstream 100 bases:

>100_bases
TGGGCCACCCCCAGCCGTTCCGCATCATGCTGACCATGCACATCCACCCGGGCCGCGAGCAGGAGTTCGAGCAGACCTGG
CTGCGGATCGGGGACGGCGT

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MFPDLAGKRALVTGGTRGIGRAVVLGLAQAGATVVVGHQRQTEDAESLRRELKDTGNDHLLVQADVADPAQITELVSATG
THLGGLDIVVNSVGTISHIPYADLPLDAWTQVLTTNLTATHLVTQGALPLLGDSGTVVNIGSGAGLVGVPLRAHYTAAKT
GLIGLTRSLSKELGSKGIRVNLVSPGVIETDQAAGMPPAARAAYTNRIPLGRLGEANEVAAVVLFLASDVSSYVNGATFT
VDGGI

Sequences:

>Translated_245_residues
MFPDLAGKRALVTGGTRGIGRAVVLGLAQAGATVVVGHQRQTEDAESLRRELKDTGNDHLLVQADVADPAQITELVSATG
THLGGLDIVVNSVGTISHIPYADLPLDAWTQVLTTNLTATHLVTQGALPLLGDSGTVVNIGSGAGLVGVPLRAHYTAAKT
GLIGLTRSLSKELGSKGIRVNLVSPGVIETDQAAGMPPAARAAYTNRIPLGRLGEANEVAAVVLFLASDVSSYVNGATFT
VDGGI
>Mature_245_residues
MFPDLAGKRALVTGGTRGIGRAVVLGLAQAGATVVVGHQRQTEDAESLRRELKDTGNDHLLVQADVADPAQITELVSATG
THLGGLDIVVNSVGTISHIPYADLPLDAWTQVLTTNLTATHLVTQGALPLLGDSGTVVNIGSGAGLVGVPLRAHYTAAKT
GLIGLTRSLSKELGSKGIRVNLVSPGVIETDQAAGMPPAARAAYTNRIPLGRLGEANEVAAVVLFLASDVSSYVNGATFT
VDGGI

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=37.6518218623482, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=34.5833333333333, Blast_Score=122, Evalue=3e-28,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=32.4, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=33.4677419354839, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI66933014, Length=249, Percent_Identity=32.9317269076305, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=32.9268292682927, Blast_Score=104, Evalue=7e-23,
Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=35.7723577235772, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=31.0483870967742, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=33.1896551724138, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI4503301, Length=232, Percent_Identity=31.0344827586207, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=33.1632653061224, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=30.241935483871, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=33.8541666666667, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI109715829, Length=233, Percent_Identity=30.4721030042918, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI40254986, Length=198, Percent_Identity=29.2929292929293, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI32455239, Length=199, Percent_Identity=31.6582914572864, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI5031765, Length=199, Percent_Identity=31.6582914572864, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI224922801, Length=182, Percent_Identity=31.8681318681319, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI7705855, Length=201, Percent_Identity=30.8457711442786, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI7706318, Length=187, Percent_Identity=28.3422459893048, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=26.2948207171315, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI40807363, Length=203, Percent_Identity=29.064039408867, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI4504505, Length=248, Percent_Identity=27.0161290322581, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI4504503, Length=194, Percent_Identity=32.9896907216495, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=31.3513513513514, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=36.8852459016393, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=36.2139917695473, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=33.1967213114754, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=32.520325203252, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=30.3643724696356, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=30.5439330543933, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=30.6122448979592, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=31.8725099601594, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=28.3464566929134, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=28.8537549407115, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI2367365, Length=242, Percent_Identity=30.9917355371901, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1789057, Length=252, Percent_Identity=27.3809523809524, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=29.6703296703297, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=36.1111111111111, Blast_Score=142, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=36.5853658536585, Blast_Score=137, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=34.7490347490347, Blast_Score=115, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=33.4677419354839, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=29.8850574712644, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=32.9545454545455, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=32.2448979591837, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=32.8185328185328, Blast_Score=107, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=32.5301204819277, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=33.0798479087452, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17551412, Length=269, Percent_Identity=32.7137546468402, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=32.3076923076923, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17560220, Length=259, Percent_Identity=31.6602316602317, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=31.1284046692607, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=31.2741312741313, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=245, Percent_Identity=30.2040816326531, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=32.3308270676692, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=31.0756972111554, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=31.3492063492063, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=28.90625, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=29.5019157088123, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17565030, Length=255, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=31.1787072243346, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=30.6772908366534, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=32.046332046332, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=28.90625, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17561272, Length=250, Percent_Identity=31.6, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=27.0588235294118, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=203, Percent_Identity=28.0788177339901, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=252, Percent_Identity=30.1587301587302, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=197, Percent_Identity=27.4111675126904, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=196, Percent_Identity=27.0408163265306, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=192, Percent_Identity=30.2083333333333, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71997402, Length=191, Percent_Identity=28.7958115183246, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=191, Percent_Identity=28.7958115183246, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17558628, Length=191, Percent_Identity=29.8429319371728, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=206, Percent_Identity=24.7572815533981, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212645366, Length=137, Percent_Identity=37.956204379562, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=31.3492063492063, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6323882, Length=240, Percent_Identity=30.4166666666667, Blast_Score=89, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6322861, Length=244, Percent_Identity=25.4098360655738, Blast_Score=76, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6319635, Length=263, Percent_Identity=27.3764258555133, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=34.8178137651822, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24639444, Length=245, Percent_Identity=38.3673469387755, Blast_Score=130, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=34.136546184739, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=35.3174603174603, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=32.4, Blast_Score=114, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=32.9411764705882, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24643142, Length=250, Percent_Identity=35.2, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24644337, Length=249, Percent_Identity=32.9317269076305, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17737361, Length=251, Percent_Identity=27.4900398406374, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21358495, Length=192, Percent_Identity=28.6458333333333, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=29.3193717277487, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355631, Length=175, Percent_Identity=32.5714285714286, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI161076933, Length=227, Percent_Identity=29.0748898678414, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24584748, Length=227, Percent_Identity=29.0748898678414, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581726, Length=229, Percent_Identity=26.6375545851528, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007236, Length=195, Percent_Identity=30.2564102564103, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24641232, Length=212, Percent_Identity=30.188679245283, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574402, Length=220, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24584744, Length=220, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24580925, Length=202, Percent_Identity=27.7227722772277, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI18859837, Length=189, Percent_Identity=28.042328042328, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24665243, Length=256, Percent_Identity=30.46875, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI221331218, Length=256, Percent_Identity=30.46875, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24649181, Length=194, Percent_Identity=29.8969072164948, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25012; Mature: 25012

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPDLAGKRALVTGGTRGIGRAVVLGLAQAGATVVVGHQRQTEDAESLRRELKDTGNDHL
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEE
LVQADVADPAQITELVSATGTHLGGLDIVVNSVGTISHIPYADLPLDAWTQVLTTNLTAT
EEEECCCCHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHH
HLVTQGALPLLGDSGTVVNIGSGAGLVGVPLRAHYTAAKTGLIGLTRSLSKELGSKGIRV
HHHHCCCCEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
NLVSPGVIETDQAAGMPPAARAAYTNRIPLGRLGEANEVAAVVLFLASDVSSYVNGATFT
EEECCCCEECCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
VDGGI
ECCCC
>Mature Secondary Structure
MFPDLAGKRALVTGGTRGIGRAVVLGLAQAGATVVVGHQRQTEDAESLRRELKDTGNDHL
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEE
LVQADVADPAQITELVSATGTHLGGLDIVVNSVGTISHIPYADLPLDAWTQVLTTNLTAT
EEEECCCCHHHHHHHHHHCCCCCCCHHHEEECCCCCCCCCCCCCCHHHHHHHHHCCCHHH
HLVTQGALPLLGDSGTVVNIGSGAGLVGVPLRAHYTAAKTGLIGLTRSLSKELGSKGIRV
HHHHCCCCEEECCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
NLVSPGVIETDQAAGMPPAARAAYTNRIPLGRLGEANEVAAVVLFLASDVSSYVNGATFT
EEECCCCEECCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE
VDGGI
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA