| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is curA [H]
Identifier: 158314223
GI number: 158314223
Start: 2847022
End: 2848374
Strand: Direct
Name: curA [H]
Synonym: Franean1_2393
Alternate gene names: 158314223
Gene position: 2847022-2848374 (Clockwise)
Preceding gene: 158314222
Following gene: 158314224
Centisome position: 31.7
GC content: 73.1
Gene sequence:
>1353_bases GTGAGCAAACCCACGCAGCGGTCGCGGCCGGACGACGCTCACGGGCCGGCGTCACGGGACGGGGGTCCGCGCCGCACCGC GGTGACCGGGGTCGGCGTCGTCGCCCCCGGTGGCTCGAACCGCAAAGAGTTCTGGACCCTGCTCACAGACGGCCGCACCG CCACCCGCCGGCTGTCCTTCTTCGACCCGTCGCCGTTCCGGTCGCAGGTCGCGGCCGAGTGCGACTTCGACCCGCTCGCC GCCGGCCTCACCCGCCAGGAGATCGCGCGCAACGACCGGTTCGTGCAGTTCGCGCTGGCCGCGGCCGCGGAGGCGGTGGC CGACAGCGGGTTGGACCTCGGCCTCGGTGTCGGCGGCACCGAACGCGAGCCGGGCGACGGGCCGGTCGTCGGGGTGAGCA TGGGCAGCGCCGTCGGGGCGACCACCCGGCTCGAGAACGAGTACGTGGTCGTCAGCGACGGCGGGAAGCACTGGGAGGTC GACCCGCGCTACGCGAGCTCGTTCCTCTACCACGCGCTCGTGCCGAGCTGCCTGGCCACCGAGATCGCCTGCCGCTTCGG CGCGCACGGCCCGTCGTTCGTGGTCTCCACCGGGTGCACCTCCGGCATCGACGCGGTCGGCTACGGCCACCAGCTCATCG TCGACGGCGAGGCGGACATCGTGATCGCCGGCGCCTCCGACGCGCCGCTCTCGCCGATCTCCATCGCCTGCTTCGACGCC ATCCGCGCCACCTCGGCCCGCAACGACGACCCCGAGCACGCCTCGCGGCCGTTCGACGCCAGCCGCGACGGCTTCGTGAT GGGGGAGGGCAGCGCCGTGCTGATCCTCGAGGAGCTGGAGTCGGCCCGGGCCCGCGGCGCGCACATCTACTGCGAGGTCG GCGGGTACGCCTCGCGGTCCAACGCTTTCCACATGACCGGCCTGCGCCCGGACGGCGTCGAGATGGCCGAGGCCATCCGC ATCGCCCTGGACCAGGCGCGGCTCGACCCGTCCGCCGTCGACTACGTCAACGCCCACGGGTCGGGGACGAAGCAGAACGA CCGGCACGAGACGGCCGCTTTCAAACGGTCGCTGGGCGCCCACGCCCACGAGGTGCCGGTCAGCTCGATCAAGTCGATGG TCGGCCACTCCCTCGGCGCGATCGGCTCCATCGAGCTCGCGGCCTGCGCGCTGGCGATCGAGCACAACGTGGTGCCGCCG ACGGCGAACTGGTCGACCCGCGACCCCGAGTGCGACCTGGACTACGTCCCGAACACCGCCCGCGACCACACGGTGGACGC GGCGCTGTCGGTCGGCAGCGGGTTCGGCGGGTTCCAGTCGGCCATCGTCCTGACCTCGGCGGACCGGGCATGA
Upstream 100 bases:
>100_bases GCGACGACGTGGCCTTCCTCGTCTTCCACCTCAGCCCGCTCGCGCCGCGGCCCGACCTGGGGCACGTGGACACCGAGCCG CTGCCTGAGCAGTCGCAGCA
Downstream 100 bases:
>100_bases CCGTCCTCGACACCGCGCCGTCCGGGACGGCCGGCCCGGCCCGGCCGGCCGCGGGCGCGGTGCGGCCGGTCATCACCGGG CTCGGGGTCATCGCGCCCAG
Product: beta-ketoacyl synthase
Products: [acyl carrier protein]; acetoacetyl-ACP; CO2; [acyl carrier protein]; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSKPTQRSRPDDAHGPASRDGGPRRTAVTGVGVVAPGGSNRKEFWTLLTDGRTATRRLSFFDPSPFRSQVAAECDFDPLA AGLTRQEIARNDRFVQFALAAAAEAVADSGLDLGLGVGGTEREPGDGPVVGVSMGSAVGATTRLENEYVVVSDGGKHWEV DPRYASSFLYHALVPSCLATEIACRFGAHGPSFVVSTGCTSGIDAVGYGHQLIVDGEADIVIAGASDAPLSPISIACFDA IRATSARNDDPEHASRPFDASRDGFVMGEGSAVLILEELESARARGAHIYCEVGGYASRSNAFHMTGLRPDGVEMAEAIR IALDQARLDPSAVDYVNAHGSGTKQNDRHETAAFKRSLGAHAHEVPVSSIKSMVGHSLGAIGSIELAACALAIEHNVVPP TANWSTRDPECDLDYVPNTARDHTVDAALSVGSGFGGFQSAIVLTSADRA
Sequences:
>Translated_450_residues MSKPTQRSRPDDAHGPASRDGGPRRTAVTGVGVVAPGGSNRKEFWTLLTDGRTATRRLSFFDPSPFRSQVAAECDFDPLA AGLTRQEIARNDRFVQFALAAAAEAVADSGLDLGLGVGGTEREPGDGPVVGVSMGSAVGATTRLENEYVVVSDGGKHWEV DPRYASSFLYHALVPSCLATEIACRFGAHGPSFVVSTGCTSGIDAVGYGHQLIVDGEADIVIAGASDAPLSPISIACFDA IRATSARNDDPEHASRPFDASRDGFVMGEGSAVLILEELESARARGAHIYCEVGGYASRSNAFHMTGLRPDGVEMAEAIR IALDQARLDPSAVDYVNAHGSGTKQNDRHETAAFKRSLGAHAHEVPVSSIKSMVGHSLGAIGSIELAACALAIEHNVVPP TANWSTRDPECDLDYVPNTARDHTVDAALSVGSGFGGFQSAIVLTSADRA >Mature_449_residues SKPTQRSRPDDAHGPASRDGGPRRTAVTGVGVVAPGGSNRKEFWTLLTDGRTATRRLSFFDPSPFRSQVAAECDFDPLAA GLTRQEIARNDRFVQFALAAAAEAVADSGLDLGLGVGGTEREPGDGPVVGVSMGSAVGATTRLENEYVVVSDGGKHWEVD PRYASSFLYHALVPSCLATEIACRFGAHGPSFVVSTGCTSGIDAVGYGHQLIVDGEADIVIAGASDAPLSPISIACFDAI RATSARNDDPEHASRPFDASRDGFVMGEGSAVLILEELESARARGAHIYCEVGGYASRSNAFHMTGLRPDGVEMAEAIRI ALDQARLDPSAVDYVNAHGSGTKQNDRHETAAFKRSLGAHAHEVPVSSIKSMVGHSLGAIGSIELAACALAIEHNVVPPT ANWSTRDPECDLDYVPNTARDHTVDAALSVGSGFGGFQSAIVLTSADRA
Specific function: Catalyzes The Condensation Reaction Of Fatty Acid Synthesis By The Addition To An Acyl Acceptor Of Two Carbons From Malonyl-Acp. Has A Preference For Short Chain Acid Substrates And May Function To Supply The Octanoic Substrates For Lipoic Acid Biosynthe
COG id: COG0304
COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]
Homologues:
Organism=Homo sapiens, GI8923559, Length=432, Percent_Identity=34.0277777777778, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI41872631, Length=437, Percent_Identity=24.9427917620137, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI223972627, Length=169, Percent_Identity=32.5443786982249, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1787337, Length=422, Percent_Identity=35.781990521327, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1788663, Length=426, Percent_Identity=31.2206572769953, Blast_Score=168, Evalue=5e-43, Organism=Caenorhabditis elegans, GI71983541, Length=426, Percent_Identity=29.3427230046948, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI71983535, Length=254, Percent_Identity=35.0393700787402, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI212642053, Length=441, Percent_Identity=24.9433106575964, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17550940, Length=225, Percent_Identity=27.1111111111111, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320904, Length=465, Percent_Identity=29.4623655913978, Blast_Score=164, Evalue=3e-41, Organism=Drosophila melanogaster, GI24644341, Length=437, Percent_Identity=38.6727688787185, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI19920632, Length=473, Percent_Identity=24.3128964059197, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI221330659, Length=473, Percent_Identity=24.3128964059197, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24581345, Length=304, Percent_Identity=25.6578947368421, Blast_Score=90, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000794 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]
EC number: 2.3.1.41 [C]
Molecular weight: Translated: 47056; Mature: 46924
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPTQRSRPDDAHGPASRDGGPRRTAVTGVGVVAPGGSNRKEFWTLLTDGRTATRRLSF CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCHHEEEEC FDPSPFRSQVAAECDFDPLAAGLTRQEIARNDRFVQFALAAAAEAVADSGLDLGLGVGGT CCCCHHHHHHHHCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCC EREPGDGPVVGVSMGSAVGATTRLENEYVVVSDGGKHWEVDPRYASSFLYHALVPSCLAT CCCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHH EIACRFGAHGPSFVVSTGCTSGIDAVGYGHQLIVDGEADIVIAGASDAPLSPISIACFDA HHHHHHCCCCCCEEEECCCCCCCHHCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHH IRATSARNDDPEHASRPFDASRDGFVMGEGSAVLILEELESARARGAHIYCEVGGYASRS HHHHCCCCCCHHHHCCCCCCCCCCEEEECCCEEEEEHHHHHHHCCCCEEEEEECCCCCCC NAFHMTGLRPDGVEMAEAIRIALDQARLDPSAVDYVNAHGSGTKQNDRHETAAFKRSLGA CCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHCC HAHEVPVSSIKSMVGHSLGAIGSIELAACALAIEHNVVPPTANWSTRDPECDLDYVPNTA CHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RDHTVDAALSVGSGFGGFQSAIVLTSADRA CCCHHHHHHCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure SKPTQRSRPDDAHGPASRDGGPRRTAVTGVGVVAPGGSNRKEFWTLLTDGRTATRRLSF CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCHHEEEEC FDPSPFRSQVAAECDFDPLAAGLTRQEIARNDRFVQFALAAAAEAVADSGLDLGLGVGGT CCCCHHHHHHHHCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCC EREPGDGPVVGVSMGSAVGATTRLENEYVVVSDGGKHWEVDPRYASSFLYHALVPSCLAT CCCCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHH EIACRFGAHGPSFVVSTGCTSGIDAVGYGHQLIVDGEADIVIAGASDAPLSPISIACFDA HHHHHHCCCCCCEEEECCCCCCCHHCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHH IRATSARNDDPEHASRPFDASRDGFVMGEGSAVLILEELESARARGAHIYCEVGGYASRS HHHHCCCCCCHHHHCCCCCCCCCCEEEECCCEEEEEHHHHHHHCCCCEEEEEECCCCCCC NAFHMTGLRPDGVEMAEAIRIALDQARLDPSAVDYVNAHGSGTKQNDRHETAAFKRSLGA CCEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHCC HAHEVPVSSIKSMVGHSLGAIGSIELAACALAIEHNVVPPTANWSTRDPECDLDYVPNTA CHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC RDHTVDAALSVGSGFGGFQSAIVLTSADRA CCCHHHHHHCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: None [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.138 {cis-9-hexadecenoyl-ACP}} 0.017 {cis-9-hexadecenoyl-ACP}} 0.012 {cis-3-decenoyl-ACP}} 0.04 {acetyl-ACP}} 0.031 {acetyl-ACP}} [C]
Substrates: acetyl-ACP; malonyl-ACP; acyl-ACP [C]
Specific reaction: acetyl-ACP + malonyl-ACP = [acyl carrier protein] + acetoacetyl-ACP + CO2 acyl-ACP + malonyl-ACP = [acyl carrier protein] + beta-ketoacyl-ACP + CO2 [C]
General reaction: Acyl group transfer [C]
Inhibitor: Acetyl-CoA; Acyl-CoA; Iodoacetamide; N-Ethyl maleimide acyl -ACP-derivatives protect, malonyl-ACP-decarboxylation, Cerulenin [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1644304 [H]