Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314190

Identifier: 158314190

GI number: 158314190

Start: 2805078

End: 2805473

Strand: Direct

Name: 158314190

Synonym: Franean1_2360

Alternate gene names: NA

Gene position: 2805078-2805473 (Clockwise)

Preceding gene: 158314189

Following gene: 158314191

Centisome position: 31.23

GC content: 73.48

Gene sequence:

>396_bases
GTGGCCCCGGTCAACGAGGGGATGTGGCGGGCGGCCGCGGCCGGGCGCCTCGACGTCCAGCGGTGTGCGTCCTGCGGCGC
GCACCGCTACCCGCCCACCGACGGCTGCTACCGCTGCAGCTCACCGGAGTGGGAGTGGTCGACGGTGCCCGGCACCGGCA
CCGTGTACTCCTACATCTGGGTGCCCGACCGGACGCGGGCGACCGAGCCGCGACCGGCCGTCTACAACGTCGCCGTCGTC
ACGCTGGACGGCACCGAGGGAGATCCCGTGCGGATCCTCAGCAACGTCGTCGACGCCTGGACCCAGGACGACCTCCAGGT
CGGGCAGCGGGTCGGGCTCGCGCCGGTGACCTTCGACGACGGCCTGGCCCTGCCCTGCTTCCGGACGCTGGCATGA

Upstream 100 bases:

>100_bases
GTGCAACCCGTCCGGCGTGCAACCCGTCCGGAATGAAAGGGAGCGAGCGGAAACGGTGACCGAAGCTGTCAACCGGCCGG
CCGGCATGCCCGACCCTGTC

Downstream 100 bases:

>100_bases
GCGGCGGGTTCATCCGGGACGCCGCGTGCATCGTCGGGATCGGTCACTCACAGTACGGAACCCGCGGCTCGCTGGCGCCG
CTCGGCCTGACCCGCATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAPVNEGMWRAAAAGRLDVQRCASCGAHRYPPTDGCYRCSSPEWEWSTVPGTGTVYSYIWVPDRTRATEPRPAVYNVAVV
TLDGTEGDPVRILSNVVDAWTQDDLQVGQRVGLAPVTFDDGLALPCFRTLA

Sequences:

>Translated_131_residues
MAPVNEGMWRAAAAGRLDVQRCASCGAHRYPPTDGCYRCSSPEWEWSTVPGTGTVYSYIWVPDRTRATEPRPAVYNVAVV
TLDGTEGDPVRILSNVVDAWTQDDLQVGQRVGLAPVTFDDGLALPCFRTLA
>Mature_130_residues
APVNEGMWRAAAAGRLDVQRCASCGAHRYPPTDGCYRCSSPEWEWSTVPGTGTVYSYIWVPDRTRATEPRPAVYNVAVVT
LDGTEGDPVRILSNVVDAWTQDDLQVGQRVGLAPVTFDDGLALPCFRTLA

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14288; Mature: 14157

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPVNEGMWRAAAAGRLDVQRCASCGAHRYPPTDGCYRCSSPEWEWSTVPGTGTVYSYIW
CCCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCEEECCCCCCEEEEEE
VPDRTRATEPRPAVYNVAVVTLDGTEGDPVRILSNVVDAWTQDDLQVGQRVGLAPVTFDD
CCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCC
GLALPCFRTLA
CCCCCHHHHCC
>Mature Secondary Structure 
APVNEGMWRAAAAGRLDVQRCASCGAHRYPPTDGCYRCSSPEWEWSTVPGTGTVYSYIW
CCCCCCCCHHHCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCEEECCCCCCEEEEEE
VPDRTRATEPRPAVYNVAVVTLDGTEGDPVRILSNVVDAWTQDDLQVGQRVGLAPVTFDD
CCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCC
GLALPCFRTLA
CCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA