| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314189
Identifier: 158314189
GI number: 158314189
Start: 2803704
End: 2804918
Strand: Direct
Name: 158314189
Synonym: Franean1_2359
Alternate gene names: NA
Gene position: 2803704-2804918 (Clockwise)
Preceding gene: 158314188
Following gene: 158314190
Centisome position: 31.21
GC content: 67.98
Gene sequence:
>1215_bases GTGAGTATCCAGAACCCCGAGGCTCGTCCGGATCTCGGTTATCCGTTGATCGACGCCGACAATCATTACTATGAGCCGTA CGACTGCTTCACCCGCCTCATCGAACCGGCCTTCGCCGACCGGGCCATCAACGTTCGGGTCGATGCCAAGGGCCGCGGGA AGCTTTATTTCGGCGACCGGCAGTTCCGTTTCATGCGGGTGATCCAGACCGACTACATCGGCGCGCCGGGCTCGCTGCGC CAGATGCTGGACGACCCCGACAGCAAGGACGGCTTCGTCCACCGCGAGATCATCCGCGGCTGGGACCACCCCGACATGAT GCAGCGCGACGCGCGCATAGCGAAGATGGACGAGCAGGGTGTCCAGGCGGGCCTGATGCTCGGCACGGCGATGCTGCAGG CCGAGAACGAGCTGCACGACGACGTCCCCGCGCTCTACGCGAACATCCGCGCCTACAACCGCTGGCTGGACGAGGAGTGG GGCTTCAACCGGGACAACCGGATCATCACAGCGCCGATGATCTCCCTGGTGGACGCCGAGCTGGCCACCGCCGAGATCGA GCGGGTCATCGCCGCCGGCGCCCGCGTCGTCGTCATGAAGCCCGGTCCGCTGTGGGGCCGCTCCCCGGTCGACCCCATGT ACGACGGGTTCTGGTCGCGGTTGCAGGAGGCGGACGTCAAGCTCGTCTTCCACAGCACCGACCCGCGCTACCTGGCCACG CTCGGCGTGCAGTTCGGCGAGTCGCCGACGCCGCCCCTGCAGGGCCAGACGCCGTTCCAGTGGTACCTCGTCTCCGGCAA GCCGGTCGCCGACACACTCGCGTCCTACGTCCTGAACAACCTGTTCGGACGGTTCCCGCGGCTGACCGTCGTCGCGCTCG AGTGCGGCGTCAACTGGGTCGTCCCGCTGCTGCACGACGTCGACCACGCCGCGCACATGGGGCGCAAGGGGCACTGGCCG GGCGGTGAGGTGGTCGGCCGGCCGAGCGAGATCCTCCTGGAGCACCTCTACGTCTCGCCGTTCTACGAGGAGGACGTGGT CGGCCTGGTCGAGGCGATCGGCCCGGAGCGTGTGCTCTTCGGGTCCGACTACCCGCACCCGGAGGGGGTCCTGTGGCCGG TGGAGTTCGCGGCCAAGCTGGACGGCCTCGACGAGCGTTCGGTGCGCATGATCATGCGCGGTAACGCCGCGCGCCTGCTC GGCATCGAGGACTGA
Upstream 100 bases:
>100_bases CGGTGAGGACGAGCTTTCGTGCTGCCCTGTCCGTTCCGGTGTCCAGAATTCCACGTGCTGCGAGTACGGGTTGGCGGCGC ATTGAGTTGGGAGCATCCTC
Downstream 100 bases:
>100_bases TCCCGACCGGCGCGAAACCCGGCCGGTACACAGTCCGTCTGGCATGCAGTCCGTCTGGCGTGCAACCCGTCCGGCGTGCA ACCCGTCCGGAATGAAAGGG
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSIQNPEARPDLGYPLIDADNHYYEPYDCFTRLIEPAFADRAINVRVDAKGRGKLYFGDRQFRFMRVIQTDYIGAPGSLR QMLDDPDSKDGFVHREIIRGWDHPDMMQRDARIAKMDEQGVQAGLMLGTAMLQAENELHDDVPALYANIRAYNRWLDEEW GFNRDNRIITAPMISLVDAELATAEIERVIAAGARVVVMKPGPLWGRSPVDPMYDGFWSRLQEADVKLVFHSTDPRYLAT LGVQFGESPTPPLQGQTPFQWYLVSGKPVADTLASYVLNNLFGRFPRLTVVALECGVNWVVPLLHDVDHAAHMGRKGHWP GGEVVGRPSEILLEHLYVSPFYEEDVVGLVEAIGPERVLFGSDYPHPEGVLWPVEFAAKLDGLDERSVRMIMRGNAARLL GIED
Sequences:
>Translated_404_residues MSIQNPEARPDLGYPLIDADNHYYEPYDCFTRLIEPAFADRAINVRVDAKGRGKLYFGDRQFRFMRVIQTDYIGAPGSLR QMLDDPDSKDGFVHREIIRGWDHPDMMQRDARIAKMDEQGVQAGLMLGTAMLQAENELHDDVPALYANIRAYNRWLDEEW GFNRDNRIITAPMISLVDAELATAEIERVIAAGARVVVMKPGPLWGRSPVDPMYDGFWSRLQEADVKLVFHSTDPRYLAT LGVQFGESPTPPLQGQTPFQWYLVSGKPVADTLASYVLNNLFGRFPRLTVVALECGVNWVVPLLHDVDHAAHMGRKGHWP GGEVVGRPSEILLEHLYVSPFYEEDVVGLVEAIGPERVLFGSDYPHPEGVLWPVEFAAKLDGLDERSVRMIMRGNAARLL GIED >Mature_403_residues SIQNPEARPDLGYPLIDADNHYYEPYDCFTRLIEPAFADRAINVRVDAKGRGKLYFGDRQFRFMRVIQTDYIGAPGSLRQ MLDDPDSKDGFVHREIIRGWDHPDMMQRDARIAKMDEQGVQAGLMLGTAMLQAENELHDDVPALYANIRAYNRWLDEEWG FNRDNRIITAPMISLVDAELATAEIERVIAAGARVVVMKPGPLWGRSPVDPMYDGFWSRLQEADVKLVFHSTDPRYLATL GVQFGESPTPPLQGQTPFQWYLVSGKPVADTLASYVLNNLFGRFPRLTVVALECGVNWVVPLLHDVDHAAHMGRKGHWPG GEVVGRPSEILLEHLYVSPFYEEDVVGLVEAIGPERVLFGSDYPHPEGVLWPVEFAAKLDGLDERSVRMIMRGNAARLLG IED
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45558; Mature: 45427
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQNPEARPDLGYPLIDADNHYYEPYDCFTRLIEPAFADRAINVRVDAKGRGKLYFGDR CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCC QFRFMRVIQTDYIGAPGSLRQMLDDPDSKDGFVHREIIRGWDHPDMMQRDARIAKMDEQG HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH VQAGLMLGTAMLQAENELHDDVPALYANIRAYNRWLDEEWGFNRDNRIITAPMISLVDAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH LATAEIERVIAAGARVVVMKPGPLWGRSPVDPMYDGFWSRLQEADVKLVFHSTDPRYLAT HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEE LGVQFGESPTPPLQGQTPFQWYLVSGKPVADTLASYVLNNLFGRFPRLTVVALECGVNWV ECHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHH VPLLHDVDHAAHMGRKGHWPGGEVVGRPSEILLEHLYVSPFYEEDVVGLVEAIGPERVLF HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEE GSDYPHPEGVLWPVEFAAKLDGLDERSVRMIMRGNAARLLGIED CCCCCCCCCEEEHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure SIQNPEARPDLGYPLIDADNHYYEPYDCFTRLIEPAFADRAINVRVDAKGRGKLYFGDR CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCC QFRFMRVIQTDYIGAPGSLRQMLDDPDSKDGFVHREIIRGWDHPDMMQRDARIAKMDEQG HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH VQAGLMLGTAMLQAENELHDDVPALYANIRAYNRWLDEEWGFNRDNRIITAPMISLVDAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH LATAEIERVIAAGARVVVMKPGPLWGRSPVDPMYDGFWSRLQEADVKLVFHSTDPRYLAT HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEE LGVQFGESPTPPLQGQTPFQWYLVSGKPVADTLASYVLNNLFGRFPRLTVVALECGVNWV ECHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHH VPLLHDVDHAAHMGRKGHWPGGEVVGRPSEILLEHLYVSPFYEEDVVGLVEAIGPERVLF HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEE GSDYPHPEGVLWPVEFAAKLDGLDERSVRMIMRGNAARLLGIED CCCCCCCCCEEEHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA