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The map label for this gene is yncB [H]

Identifier: 158314186

GI number: 158314186

Start: 2801229

End: 2801546

Strand: Direct

Name: yncB [H]

Synonym: Franean1_2355

Alternate gene names: 158314186

Gene position: 2801229-2801546 (Clockwise)

Preceding gene: 158314185

Following gene: 158314187

Centisome position: 31.19

GC content: 69.81

Gene sequence:

>318_bases
TTGAAAGGCGCCGGTCGCGTCGTTGGCAGTGTCGGCTCCCAGACGAAGGCCGCCCACGTGACCGGGAACCTCGGCTTCGA
TGCGGCTTTCGACCATCACGACGGCCGGCATGCCGACCGGCTGCGGGAGGTCGCTCCGGACGGCATCGACGTCTATTTCG
ACAACACCGGCGGCGCGCAGCTCGAGGCGGCGATCGAGGTGATGAAACCGCACGGCCGGATCGTGCTGTGTGGCGCTTTG
GCGGCGCAGAACGGCGGCATCGGCGCGACCGGGCCGCCCACACCGACGTCGCCGGATGGCTCCGTGACGGCAGCCTGA

Upstream 100 bases:

>100_bases
CGCCATCGACGACCGAGTTTTTCCCACCCTGTCGGCGCATCTCGGGTCCTACCTGACTGCATGGGTCGGCTCGGTCGGCC
TGGCCGGCCAGATCGCCCGG

Downstream 100 bases:

>100_bases
CCCTTGACGAGACGATTGTCGACGGGCTGGAAAACGCCCCACAGGCCTTCATCGACATGCTGGGCGGTGTGTATACCGGC
AAGGTCGTCGTTCGGCTCCC

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKGAGRVVGSVGSQTKAAHVTGNLGFDAAFDHHDGRHADRLREVAPDGIDVYFDNTGGAQLEAAIEVMKPHGRIVLCGAL
AAQNGGIGATGPPTPTSPDGSVTAA

Sequences:

>Translated_105_residues
MKGAGRVVGSVGSQTKAAHVTGNLGFDAAFDHHDGRHADRLREVAPDGIDVYFDNTGGAQLEAAIEVMKPHGRIVLCGAL
AAQNGGIGATGPPTPTSPDGSVTAA
>Mature_105_residues
MKGAGRVVGSVGSQTKAAHVTGNLGFDAAFDHHDGRHADRLREVAPDGIDVYFDNTGGAQLEAAIEVMKPHGRIVLCGAL
AAQNGGIGATGPPTPTSPDGSVTAA

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=96, Percent_Identity=40.625, Blast_Score=74, Evalue=2e-14,
Organism=Homo sapiens, GI226246680, Length=96, Percent_Identity=40.625, Blast_Score=74, Evalue=2e-14,
Organism=Homo sapiens, GI22748929, Length=96, Percent_Identity=40.625, Blast_Score=74, Evalue=2e-14,
Organism=Homo sapiens, GI226056130, Length=85, Percent_Identity=42.3529411764706, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI226059159, Length=85, Percent_Identity=42.3529411764706, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI226059133, Length=85, Percent_Identity=42.3529411764706, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI226510941, Length=92, Percent_Identity=38.0434782608696, Blast_Score=70, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI133901710, Length=95, Percent_Identity=34.7368421052632, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI133901712, Length=95, Percent_Identity=34.7368421052632, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 10531; Mature: 10531

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGAGRVVGSVGSQTKAAHVTGNLGFDAAFDHHDGRHADRLREVAPDGIDVYFDNTGGAQ
CCCCCCEEECCCCCCEEEEEECCCCCCCEECCCCCCCHHHHHHHCCCCEEEEEECCCCCE
LEAAIEVMKPHGRIVLCGALAAQNGGIGATGPPTPTSPDGSVTAA
EEEEHEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKGAGRVVGSVGSQTKAAHVTGNLGFDAAFDHHDGRHADRLREVAPDGIDVYFDNTGGAQ
CCCCCCEEECCCCCCEEEEEECCCCCCCEECCCCCCCHHHHHHHCCCCEEEEEECCCCCE
LEAAIEVMKPHGRIVLCGALAAQNGGIGATGPPTPTSPDGSVTAA
EEEEHEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]