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The map label for this gene is 158314183

Identifier: 158314183

GI number: 158314183

Start: 2798478

End: 2799362

Strand: Direct

Name: 158314183

Synonym: Franean1_2352

Alternate gene names: NA

Gene position: 2798478-2799362 (Clockwise)

Preceding gene: 158314182

Following gene: 158314185

Centisome position: 31.16

GC content: 71.64

Gene sequence:

>885_bases
ATGACTGGACAGGACTGGCTGGCCGCGCGGTTCGACGGACACCGCGCGCATCTGCGCTCGGTCGCGTACCGGATGCTCGG
CTCGCCGCACGAGGCGGACGACGCGGTGCAGGAGTCCTGGCTGCGGTTCAGCTCGGCCGACACCAGCGACGTGGCGAACC
TGCGCGGTTGGCTGACCACGGTCACCGGCCGGGTCTGCCTGGACATGCTGCGGGCGCGCGGCACACGGCGAGAACAGCCG
TTGGACGTCCACGTGCCGGACCCGATAGTGGGCCCGGCGGATGGTGTCGACCCGGAGCGGGAGGCACTGCTCGCCGAGTC
GGTGGGGCTCGCCCTGCACGTGGTCCTGGGGACTCTCACCCCTGCCGAGCGGCTGGCCTTCGTGCTGCACGACATGTTCG
CGGTGCCGTTCAATGACATCGCGGCGATGCTCGGCAGGTCGACGGCGGCCACCAAACAGCTGGCGAGCCGGGCCCGGGGA
CGGATCCGGGCCGGCGCGCCGCTGCCGGAAGCGGACCTGGCCCAACAGCACGAAGCGGTCCGCGCGTTCTTCGAAGCGGC
CCGTGGAGGTGACTTCGACGCGCTCGTCGCGCTCCTCGCACCGAACGTCGAGATGCGCGCGGACGGCGGCGCTGCCCGGC
CACAGGCCTCTACGGTGCTCCGGGGAGCGGCGGCGGTCGCCGGCCGGGCGCTGATGTTCGCCCGGCCGGACGCGGAGGTT
CACCCGGCCCTGGTCAACGGCGCCGCTGGCGTGGTCGTAACTTTGGACGGCCGGGCAGTCTCGATCATGGGATTCATCGT
CCGGGGACGGATGATCGCCGCGATCGATGTGCTCGCCGACGTCGACCGGTTGGGACGGCTCGAACTGTCCGCCTTCGAAC
GCTGA

Upstream 100 bases:

>100_bases
GACGGCCGAACCGGAGGCCGGGGCGCGGCGACGCGCGTGTTACGTCGGCCTGATCATCCGCGTCAGGGTCGTGACGGCAG
GTGGCGAGACAAGGGCGATC

Downstream 100 bases:

>100_bases
CGGCAGGGCGGCCCGAGCGGAGCCCGGGCCGCCGCGCTTCCTCAGCCCCAGGTGGCACCCGCCGGTTCCCTGATCGTGGT
GTTGATCCGGTTGAAGAAGT

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase ECF-Subfamily Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor; ECF-Sigma Factor; Sigma-; Sigma Factor Sigma; ECF-Family RNA Polymerase Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase ECF-Type Sigma Factor; ECF Family RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma-70 Factor; RNA Polymerase Sigma Factor Protein; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma Factor SigI; RNA Polymerase Sigma-24 Subunit; AlteRNAtive RNA Polymerase Sigma Factor SigJ-Like Protein; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; AlteRNAtive RNA Polymerase Sigma Factor; RNA Polymerase ECF-Type Sigma Factor SigJ; RNA Polymerase

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTGQDWLAARFDGHRAHLRSVAYRMLGSPHEADDAVQESWLRFSSADTSDVANLRGWLTTVTGRVCLDMLRARGTRREQP
LDVHVPDPIVGPADGVDPEREALLAESVGLALHVVLGTLTPAERLAFVLHDMFAVPFNDIAAMLGRSTAATKQLASRARG
RIRAGAPLPEADLAQQHEAVRAFFEAARGGDFDALVALLAPNVEMRADGGAARPQASTVLRGAAAVAGRALMFARPDAEV
HPALVNGAAGVVVTLDGRAVSIMGFIVRGRMIAAIDVLADVDRLGRLELSAFER

Sequences:

>Translated_294_residues
MTGQDWLAARFDGHRAHLRSVAYRMLGSPHEADDAVQESWLRFSSADTSDVANLRGWLTTVTGRVCLDMLRARGTRREQP
LDVHVPDPIVGPADGVDPEREALLAESVGLALHVVLGTLTPAERLAFVLHDMFAVPFNDIAAMLGRSTAATKQLASRARG
RIRAGAPLPEADLAQQHEAVRAFFEAARGGDFDALVALLAPNVEMRADGGAARPQASTVLRGAAAVAGRALMFARPDAEV
HPALVNGAAGVVVTLDGRAVSIMGFIVRGRMIAAIDVLADVDRLGRLELSAFER
>Mature_293_residues
TGQDWLAARFDGHRAHLRSVAYRMLGSPHEADDAVQESWLRFSSADTSDVANLRGWLTTVTGRVCLDMLRARGTRREQPL
DVHVPDPIVGPADGVDPEREALLAESVGLALHVVLGTLTPAERLAFVLHDMFAVPFNDIAAMLGRSTAATKQLASRARGR
IRAGAPLPEADLAQQHEAVRAFFEAARGGDFDALVALLAPNVEMRADGGAARPQASTVLRGAAAVAGRALMFARPDAEVH
PALVNGAAGVVVTLDGRAVSIMGFIVRGRMIAAIDVLADVDRLGRLELSAFER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31332; Mature: 31201

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQDWLAARFDGHRAHLRSVAYRMLGSPHEADDAVQESWLRFSSADTSDVANLRGWLTT
CCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VTGRVCLDMLRARGTRREQPLDVHVPDPIVGPADGVDPEREALLAESVGLALHVVLGTLT
HHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PAERLAFVLHDMFAVPFNDIAAMLGRSTAATKQLASRARGRIRAGAPLPEADLAQQHEAV
HHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHH
RAFFEAARGGDFDALVALLAPNVEMRADGGAARPQASTVLRGAAAVAGRALMFARPDAEV
HHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCC
HPALVNGAAGVVVTLDGRAVSIMGFIVRGRMIAAIDVLADVDRLGRLELSAFER
CHHHHCCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
TGQDWLAARFDGHRAHLRSVAYRMLGSPHEADDAVQESWLRFSSADTSDVANLRGWLTT
CCCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VTGRVCLDMLRARGTRREQPLDVHVPDPIVGPADGVDPEREALLAESVGLALHVVLGTLT
HHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PAERLAFVLHDMFAVPFNDIAAMLGRSTAATKQLASRARGRIRAGAPLPEADLAQQHEAV
HHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHH
RAFFEAARGGDFDALVALLAPNVEMRADGGAARPQASTVLRGAAAVAGRALMFARPDAEV
HHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCC
HPALVNGAAGVVVTLDGRAVSIMGFIVRGRMIAAIDVLADVDRLGRLELSAFER
CHHHHCCCCEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA