Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314182

Identifier: 158314182

GI number: 158314182

Start: 2797851

End: 2798351

Strand: Direct

Name: 158314182

Synonym: Franean1_2351

Alternate gene names: NA

Gene position: 2797851-2798351 (Clockwise)

Preceding gene: 158314179

Following gene: 158314183

Centisome position: 31.15

GC content: 71.86

Gene sequence:

>501_bases
ATGGACGCGACGCGCTGGGCGCCGGACGCCGGAATTCAGGCGCTGGTGGCCGGCGTCGGCGAGCTGACGTCCGGGCTGTG
CGGCGACCTGCTAGCCGCGGGATACCAGGCGAAGTCGGCTCCGACCGGCGCGGTCGCGCTCGCGGCGCTCGACGAGGCGC
CCTACGACCTGATCTTCATCGACTGGGGGTTGCCGGACGGCGCTGGCGCCGACCTGTGCCACCAGATCCGGGCCCGGCCC
CAACTCGCCTACCTGTACGTCATCGTCGACCACGACGATGTCCGGGTGGGCTTCCAGCATGGTGCGGACGCCCTGGCGGA
CGATTTCATGGTCGTCCACGAGGATCACGCGCAGACGGTCGACCACGGCGACATGATCGCACGGCGCCCGCCATACCGCG
TGCTTTCCCTGCTGGCCGGCGAACGGCTCGTTGCGCGGGCCGGGGAGGCGCACAGGGTGGAGCCACCGCGGCAGGGGGCG
TGGCCGCACGTGACCGAGTGA

Upstream 100 bases:

>100_bases
GTGTTCCCGCCGGCTCGCCGGAGGGATCCTGCAACTGAGCATCAGATGCATCGCCGCCGGTGGTGAGGGTTGAGTGTCCC
TGGAGAGAAGGACATCTGAC

Downstream 100 bases:

>100_bases
TCAGATCCGGACCGCGCCGGCTCCCGGACGGCCGAACCGGAGGCCGGGGCGCGGCGACGCGCGTGTTACGTCGGCCTGAT
CATCCGCGTCAGGGTCGTGA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFIDWGLPDGAGADLCHQIRARP
QLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTVDHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGA
WPHVTE

Sequences:

>Translated_166_residues
MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFIDWGLPDGAGADLCHQIRARP
QLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTVDHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGA
WPHVTE
>Mature_166_residues
MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFIDWGLPDGAGADLCHQIRARP
QLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTVDHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGA
WPHVTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17766; Mature: 17766

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEE
DWGLPDGAGADLCHQIRARPQLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTV
ECCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEECHHCCCHHHHHCEEEEECCCCCCC
DHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGAWPHVTE
CCCCHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEE
DWGLPDGAGADLCHQIRARPQLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTV
ECCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEECHHCCCHHHHHCEEEEECCCCCCC
DHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGAWPHVTE
CCCCHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA