| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158314182
Identifier: 158314182
GI number: 158314182
Start: 2797851
End: 2798351
Strand: Direct
Name: 158314182
Synonym: Franean1_2351
Alternate gene names: NA
Gene position: 2797851-2798351 (Clockwise)
Preceding gene: 158314179
Following gene: 158314183
Centisome position: 31.15
GC content: 71.86
Gene sequence:
>501_bases ATGGACGCGACGCGCTGGGCGCCGGACGCCGGAATTCAGGCGCTGGTGGCCGGCGTCGGCGAGCTGACGTCCGGGCTGTG CGGCGACCTGCTAGCCGCGGGATACCAGGCGAAGTCGGCTCCGACCGGCGCGGTCGCGCTCGCGGCGCTCGACGAGGCGC CCTACGACCTGATCTTCATCGACTGGGGGTTGCCGGACGGCGCTGGCGCCGACCTGTGCCACCAGATCCGGGCCCGGCCC CAACTCGCCTACCTGTACGTCATCGTCGACCACGACGATGTCCGGGTGGGCTTCCAGCATGGTGCGGACGCCCTGGCGGA CGATTTCATGGTCGTCCACGAGGATCACGCGCAGACGGTCGACCACGGCGACATGATCGCACGGCGCCCGCCATACCGCG TGCTTTCCCTGCTGGCCGGCGAACGGCTCGTTGCGCGGGCCGGGGAGGCGCACAGGGTGGAGCCACCGCGGCAGGGGGCG TGGCCGCACGTGACCGAGTGA
Upstream 100 bases:
>100_bases GTGTTCCCGCCGGCTCGCCGGAGGGATCCTGCAACTGAGCATCAGATGCATCGCCGCCGGTGGTGAGGGTTGAGTGTCCC TGGAGAGAAGGACATCTGAC
Downstream 100 bases:
>100_bases TCAGATCCGGACCGCGCCGGCTCCCGGACGGCCGAACCGGAGGCCGGGGCGCGGCGACGCGCGTGTTACGTCGGCCTGAT CATCCGCGTCAGGGTCGTGA
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFIDWGLPDGAGADLCHQIRARP QLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTVDHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGA WPHVTE
Sequences:
>Translated_166_residues MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFIDWGLPDGAGADLCHQIRARP QLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTVDHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGA WPHVTE >Mature_166_residues MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFIDWGLPDGAGADLCHQIRARP QLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTVDHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGA WPHVTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17766; Mature: 17766
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEE DWGLPDGAGADLCHQIRARPQLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTV ECCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEECHHCCCHHHHHCEEEEECCCCCCC DHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGAWPHVTE CCCCHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDATRWAPDAGIQALVAGVGELTSGLCGDLLAAGYQAKSAPTGAVALAALDEAPYDLIFI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEE DWGLPDGAGADLCHQIRARPQLAYLYVIVDHDDVRVGFQHGADALADDFMVVHEDHAQTV ECCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCEEECHHCCCHHHHHCEEEEECCCCCCC DHGDMIARRPPYRVLSLLAGERLVARAGEAHRVEPPRQGAWPHVTE CCCCHHCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA