Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is mer [H]

Identifier: 158314177

GI number: 158314177

Start: 2794641

End: 2795555

Strand: Direct

Name: mer [H]

Synonym: Franean1_2345

Alternate gene names: 158314177

Gene position: 2794641-2795555 (Clockwise)

Preceding gene: 158314174

Following gene: 158314178

Centisome position: 31.11

GC content: 74.21

Gene sequence:

>915_bases
ATGCGGTTGGGTGTTTACGTGGGCGGGGCCGGCTCCACCCTGGAGGAGATGATCGGGCAGGCGCGCGCGGCTGCCGAAGC
CGGCCTCGACAGCGCCTTCTTCAGCCAGATCACCGCGTGGGACGCGCTCACCGTCGCCGCGCTCGCGGGGCAGCGGGTGC
CGGGCATCGAGCTCGGCACCGCCGTCGTCCAGACCTATCCCCGCCATCCGCTCGTGCTCGCCGGGCAGGCGCTCACCGCC
CAGGCGGCGACCGGTCACCGGGTCACCCTCGGGGTCGGGCCGAGCCACCGGCACTTCATCGAGGGCGCCTTCGGCCACTC
CTACGACCAACCGGCGCGGCACACCCGGGAGTACCTCTCCGTGCTGGGCCCGCTGCTGCGCGGGGAGCCCGTCGAGCATC
GCGGATCCTTCCTGACCGCGGCCGGGCAGGTCGAGGTGCCCGGTGCCACCGCCGTCCCGGTGCTGCTGGCCGCGCTTGGC
CCGGTCATGCTGCGTGTCGCCGGCGAGCTCGCCGACGGGACGGTGACGGTGTGGGCCGGTCCCGAGGCCCTCGCCGGGCA
TGTCGTGCCGACGATCACACGCGCCGCCGCGGCGGCGGGACGGCCCGCCCCGCGGATCGTGGCCGGCGTCCCGATCAGCA
TCACCGCCGATCCGGAAGGGGCGCGGCAGACGGTCGAGGCACAGGTGGGCTTCGCCGCCAGTTTCCCGGCCTACCGCACG
ATCCTGGCGCGGGACGGCAGGTCGGCCGTGGGGGAGACGGTCATCGCGGGAGATGAGGCGACCGTCGCGTCGTCGATCCG
GCAGTTCGCCGACGCCGGGGTGACCGATCTGCTGGTCAGTCTCGTCGGCGGCACTGAAGATCGACGGCGGACCCTGCAGT
GGCTCGGACGGTGGCGTCAGGCCGACCGGGACTAG

Upstream 100 bases:

>100_bases
CGTCGCGCATCGGATCGCACAGTCTGGCTCCCCTGGAATCTGAGCCTTCAGACTACTGTCCAAGGGGAAGCGGAACATCC
GATTCATCTTGGAGGCGTCA

Downstream 100 bases:

>100_bases
CCGAAGGACCGGGCGGGATCGCCGCCTTCGTCGCTCTCGCCCGGGCCGGTCTCGGCGCCGCCTACCTGAGCCCTGCCTGG
GCCGGCCTGGCATTGGCGAT

Product: luciferase family protein

Products: NA

Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGTAVVQTYPRHPLVLAGQALTA
QAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLSVLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALG
PVMLRVAGELADGTVTVWAGPEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT
ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQADRD

Sequences:

>Translated_304_residues
MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGTAVVQTYPRHPLVLAGQALTA
QAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLSVLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALG
PVMLRVAGELADGTVTVWAGPEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT
ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQADRD
>Mature_304_residues
MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGTAVVQTYPRHPLVLAGQALTA
QAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLSVLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALG
PVMLRVAGELADGTVTVWAGPEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT
ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQADRD

Specific function: Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mer family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019946 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.5.99.11 [H]

Molecular weight: Translated: 31496; Mature: 31496

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGT
CEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AVVQTYPRHPLVLAGQALTAQAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLS
HHHHHCCCCCEEEECCHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHH
VLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALGPVMLRVAGELADGTVTVWAG
HHHHHHCCCCCHHCCCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT
HHHHHCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCHHHHH
ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQ
HHHCCCCHHHCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
ADRD
CCCC
>Mature Secondary Structure
MRLGVYVGGAGSTLEEMIGQARAAAEAGLDSAFFSQITAWDALTVAALAGQRVPGIELGT
CEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
AVVQTYPRHPLVLAGQALTAQAATGHRVTLGVGPSHRHFIEGAFGHSYDQPARHTREYLS
HHHHHCCCCCEEEECCHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHH
VLGPLLRGEPVEHRGSFLTAAGQVEVPGATAVPVLLAALGPVMLRVAGELADGTVTVWAG
HHHHHHCCCCCHHCCCEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PEALAGHVVPTITRAAAAAGRPAPRIVAGVPISITADPEGARQTVEAQVGFAASFPAYRT
HHHHHCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCHHHHHHHHHHCCCCCCHHHHH
ILARDGRSAVGETVIAGDEATVASSIRQFADAGVTDLLVSLVGGTEDRRRTLQWLGRWRQ
HHHCCCCHHHCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
ADRD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]