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The map label for this gene is 158314162

Identifier: 158314162

GI number: 158314162

Start: 2778906

End: 2779583

Strand: Direct

Name: 158314162

Synonym: Franean1_2330

Alternate gene names: NA

Gene position: 2778906-2779583 (Clockwise)

Preceding gene: 158314159

Following gene: 158314163

Centisome position: 30.94

GC content: 71.24

Gene sequence:

>678_bases
GTGAGCACCTCCGCGGAGTCCCGACGTGACCGGCAGCGTCGGGAGCTCGTCACGGAGATCACCGCCGTCGCCCGCCGCCA
GCTCGACGAGGGCGGCCCGGGCAACGTGTCGTGGCGGGGCGTCGCCCGCGAGGTCGGCATGAACCCGGCCTCGCTCTACA
CCTACTTCGGCAGCCTCGACGACCTGTTCACCGCGCTGATCACGGCGAGCTTCCAGAGTCTCGCCGACGCTGTTCGCCAG
GCGTTCGACGACAGCGCGGGCGCCGAGCCCGTCGACCGGCTCCTCGCCTGCGTCCGGGCATACCGGGCCTGGGCCGTCGC
CAACCCCCGGCGGTTCAACCTGATCTGGACCGACCAGCTGCCCGGATACGCGGCACCGCCGGACGGACCCACCGGGACCG
CCGAACAGACGGTCTATCGGCCGTTCCTGCTAGCGGTCGGGGAGGCGGAGGGATGCGGCGACCGGCTGGTGGAGTTCGCC
ACGCTGCCCACCGACGACCAGCACCGCCTGTTGGGCCTGTTCGGCACCCTGCATGGCCTGGTGTCGCTCGAGATCAACAG
CCACCTCGCGCCGTCGATGGTCGACGGGGAGGCGCTCCTCGTCGACCGGATGACACACGCCCTGCGACACGTTCACCCGC
CCCGGGCCAGGTCCCATGTCGACACGGCGGAGAAATGA

Upstream 100 bases:

>100_bases
TCATTCGAAGTTCGAACACTGTTTGAAGAACATAGCCAAACACCGTTTGGCGAGTCAATGGCGTTCGAAAGATCAAGCTT
GTTCGGCTAGGCTCGGTGCT

Downstream 100 bases:

>100_bases
TGCCCACCCGCCGACGGCGGTGACCGGTCGAGGGCGCCGCCGCCCGATCCATGGCCAGCGCCGAGGAGTTCGGGGACGAC
GGCCGAGCCGATCCAGCCGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSTSAESRRDRQRRELVTEITAVARRQLDEGGPGNVSWRGVAREVGMNPASLYTYFGSLDDLFTALITASFQSLADAVRQ
AFDDSAGAEPVDRLLACVRAYRAWAVANPRRFNLIWTDQLPGYAAPPDGPTGTAEQTVYRPFLLAVGEAEGCGDRLVEFA
TLPTDDQHRLLGLFGTLHGLVSLEINSHLAPSMVDGEALLVDRMTHALRHVHPPRARSHVDTAEK

Sequences:

>Translated_225_residues
MSTSAESRRDRQRRELVTEITAVARRQLDEGGPGNVSWRGVAREVGMNPASLYTYFGSLDDLFTALITASFQSLADAVRQ
AFDDSAGAEPVDRLLACVRAYRAWAVANPRRFNLIWTDQLPGYAAPPDGPTGTAEQTVYRPFLLAVGEAEGCGDRLVEFA
TLPTDDQHRLLGLFGTLHGLVSLEINSHLAPSMVDGEALLVDRMTHALRHVHPPRARSHVDTAEK
>Mature_224_residues
STSAESRRDRQRRELVTEITAVARRQLDEGGPGNVSWRGVAREVGMNPASLYTYFGSLDDLFTALITASFQSLADAVRQA
FDDSAGAEPVDRLLACVRAYRAWAVANPRRFNLIWTDQLPGYAAPPDGPTGTAEQTVYRPFLLAVGEAEGCGDRLVEFAT
LPTDDQHRLLGLFGTLHGLVSLEINSHLAPSMVDGEALLVDRMTHALRHVHPPRARSHVDTAEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24651; Mature: 24520

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50977 HTH_TETR_2 ; PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSAESRRDRQRRELVTEITAVARRQLDEGGPGNVSWRGVAREVGMNPASLYTYFGSLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHH
DLFTALITASFQSLADAVRQAFDDSAGAEPVDRLLACVRAYRAWAVANPRRFNLIWTDQL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
PGYAAPPDGPTGTAEQTVYRPFLLAVGEAEGCGDRLVEFATLPTDDQHRLLGLFGTLHGL
CCCCCCCCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VSLEINSHLAPSMVDGEALLVDRMTHALRHVHPPRARSHVDTAEK
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure 
STSAESRRDRQRRELVTEITAVARRQLDEGGPGNVSWRGVAREVGMNPASLYTYFGSLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCHH
DLFTALITASFQSLADAVRQAFDDSAGAEPVDRLLACVRAYRAWAVANPRRFNLIWTDQL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
PGYAAPPDGPTGTAEQTVYRPFLLAVGEAEGCGDRLVEFATLPTDDQHRLLGLFGTLHGL
CCCCCCCCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VSLEINSHLAPSMVDGEALLVDRMTHALRHVHPPRARSHVDTAEK
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]