Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314159

Identifier: 158314159

GI number: 158314159

Start: 2776254

End: 2776727

Strand: Direct

Name: 158314159

Synonym: Franean1_2327

Alternate gene names: NA

Gene position: 2776254-2776727 (Clockwise)

Preceding gene: 158314158

Following gene: 158314162

Centisome position: 30.91

GC content: 69.83

Gene sequence:

>474_bases
ATGAGGCGTCGCAATCTCGGCAGCCCGCCTTCCGCAAAGAATCCGACATGCTGCAGCAGCGTTCGCCGGGTAGCCAGGGC
GCAGCCCCCTCGGGTGGGGGCCGCTTTCCGGCACCATCCGCGACGCCCAGGACCTCCACGAGACCGACCTGCGCCGGACC
GCGTTCCCGCGTTTCCAGGTGACAACCTGGCCGCCAATCTGGCCCTGGTCGAGCGGGTGGCTCGACTGGCCATGGAGAAG
GGCATCACACCTGCCCAGCTGGCGCTCGCCTGGGTACTCGCCCGGGGTGAGGACATCGTCGCCATCCTGGCACCCGTCGC
CGCGGCTATCTGGAGCAGAACATCGCCGCCGCGGATATCGTGCTCACCCCGGACGACCTGGCCGACCTGGACAGCGCGGC
GCGGCGCGGCGCGGCACGGCGCTAGCGCAGGCGACAGGTACTACTCCGAGATGATGAAGACGGCCGGGTGCTGA

Upstream 100 bases:

>100_bases
TACCGGCCGGCCGCGGGTTGATTGTCAAGGCCGACGATCAGGGCGCGTGCGAGTCGCATGCCAGAGTGGCGCGAAGGTCG
CCGTGGGTAGCCGCCAGCTC

Downstream 100 bases:

>100_bases
CGTCGCATCGCCCGCTCAAGCCTCGCCTCGACGCGGGATCAGTCGGGCCTCAGGCCCGACAGGACGGCGCGTGCGGTCTG
ACTGACCCAACCCGGGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRRRNLGSPPSAKNPTCCSSVRRVARAQPPRVGAAFRHHPRRPGPPRDRPAPDRVPAFPGDNLAANLALVERVARLAMEK
GITPAQLALAWVLARGEDIVAILAPVAAAIWSRTSPPRISCSPRTTWPTWTARRGAARHGASAGDRYYSEMMKTAGC

Sequences:

>Translated_157_residues
MRRRNLGSPPSAKNPTCCSSVRRVARAQPPRVGAAFRHHPRRPGPPRDRPAPDRVPAFPGDNLAANLALVERVARLAMEK
GITPAQLALAWVLARGEDIVAILAPVAAAIWSRTSPPRISCSPRTTWPTWTARRGAARHGASAGDRYYSEMMKTAGC
>Mature_157_residues
MRRRNLGSPPSAKNPTCCSSVRRVARAQPPRVGAAFRHHPRRPGPPRDRPAPDRVPAFPGDNLAANLALVERVARLAMEK
GITPAQLALAWVLARGEDIVAILAPVAAAIWSRTSPPRISCSPRTTWPTWTARRGAARHGASAGDRYYSEMMKTAGC

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17005; Mature: 17005

Theoretical pI: Translated: 12.15; Mature: 12.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRNLGSPPSAKNPTCCSSVRRVARAQPPRVGAAFRHHPRRPGPPRDRPAPDRVPAFPG
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
DNLAANLALVERVARLAMEKGITPAQLALAWVLARGEDIVAILAPVAAAIWSRTSPPRIS
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
CSPRTTWPTWTARRGAARHGASAGDRYYSEMMKTAGC
CCCCCCCCCCHHHCCCHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRRNLGSPPSAKNPTCCSSVRRVARAQPPRVGAAFRHHPRRPGPPRDRPAPDRVPAFPG
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
DNLAANLALVERVARLAMEKGITPAQLALAWVLARGEDIVAILAPVAAAIWSRTSPPRIS
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
CSPRTTWPTWTARRGAARHGASAGDRYYSEMMKTAGC
CCCCCCCCCCHHHCCCHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA