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The map label for this gene is oxyR [H]

Identifier: 158314124

GI number: 158314124

Start: 2736585

End: 2737547

Strand: Direct

Name: oxyR [H]

Synonym: Franean1_2291

Alternate gene names: 158314124

Gene position: 2736585-2737547 (Clockwise)

Preceding gene: 158314119

Following gene: 158314125

Centisome position: 30.47

GC content: 76.43

Gene sequence:

>963_bases
ATGGCCCAACCTCAGCCCACGCTCGCTCAGCTACGAGCCCTCGTGGGTGTCGCGGATCACCGGCACTTCGGTCGGGCCGC
GACCTCGCTGCACGTCAGCCAGCCGACGCTGTCGAGCGCCGTCGCCGCGCTGGAGCGCACCCTGGGTATCCAGCTCGTCG
AGCGGACGACCCGCAGCGTGCTGCTGACGCCGGTGGGGGAGGAGATCGTCCAGCGGGCGCGCGGGGTGCTCGGGGCCGTC
GACGACATCGCCCAGCTCGCGGTGCGCGCGCGGGCGCCGCTGTCGGGCGACATCCGGCTCGGCGTCATCCCCACGGTGGC
GCCCTACCTGCTGCCCCAGCTGCTGCCGTCGCTGAGGGCCCGCCGGCCGGAGGCGCGGCTGCGGCTGCGCGAGGCGCAGA
CGTCCGCGCTGCTGGAGGAGCTGCGCGGCGGCTCGCTGGACCTGGCGCTGCTCGCCCTGCCGACGGACGAGCCCGGGGTG
GCCGAGCTGCCGCTCTACGACGAGGACTTCGTGCTCGTGACGCCCGTCGACCACCCGATGGCCGGCAGCGCCGCGCTGCC
GGTCTCCTCCCTGTGCGGCCGGGACCTGCTCCTCCTCGAGGACGGCCACTGCTTCCGGGCGCAGGCCCTGGACGTCTGCC
GCGAGGCCGGGGCACGCGAGCGCAGTGCGCTGCGCGCGGCGAGCCTGTCCACGATCGTGCAGATGGTCGCCGGCGGCCTG
GGACTGACGCTGATCCCGGCGGCGGCGGTGGGCGTCGAGGTGGGGGAGGGGCGCGGCCTGGCGACGGCGACCTTCCGTAA
CCCGGCGCCGCGCCGGCGCATCGGCCTCGCCTACCGGACGACCTCGGCCCGGGTGGCGGACTGGACCCTGCTCGCGGCCG
AGATCCGCGAGGCGCTGCCCGGCACGGCCCTGGAGGTCACGCCGGTGCCCGCACCCGAGCGGACACCGGCTCCCGTCGGC
TGA

Upstream 100 bases:

>100_bases
TCCTTTCGGTGCGCCCCGGAGTGGGGCACGGGCTCCACTCTCGCGATCGGGGACTCAGAAGAGAAATCGAAAGATTCGGC
AAGTCTGATAGCTTCTCTCT

Downstream 100 bases:

>100_bases
CCCGGCCCGCCCAGGTCGACCGCGGCTGCTCTCCGTGACGCCCGGCACGCGGCCGAGGCCCGCCCGCCGCCGCCCGCCCG
GCCGCGCTCCGCCGGGCCTC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MAQPQPTLAQLRALVGVADHRHFGRAATSLHVSQPTLSSAVAALERTLGIQLVERTTRSVLLTPVGEEIVQRARGVLGAV
DDIAQLAVRARAPLSGDIRLGVIPTVAPYLLPQLLPSLRARRPEARLRLREAQTSALLEELRGGSLDLALLALPTDEPGV
AELPLYDEDFVLVTPVDHPMAGSAALPVSSLCGRDLLLLEDGHCFRAQALDVCREAGARERSALRAASLSTIVQMVAGGL
GLTLIPAAAVGVEVGEGRGLATATFRNPAPRRRIGLAYRTTSARVADWTLLAAEIREALPGTALEVTPVPAPERTPAPVG

Sequences:

>Translated_320_residues
MAQPQPTLAQLRALVGVADHRHFGRAATSLHVSQPTLSSAVAALERTLGIQLVERTTRSVLLTPVGEEIVQRARGVLGAV
DDIAQLAVRARAPLSGDIRLGVIPTVAPYLLPQLLPSLRARRPEARLRLREAQTSALLEELRGGSLDLALLALPTDEPGV
AELPLYDEDFVLVTPVDHPMAGSAALPVSSLCGRDLLLLEDGHCFRAQALDVCREAGARERSALRAASLSTIVQMVAGGL
GLTLIPAAAVGVEVGEGRGLATATFRNPAPRRRIGLAYRTTSARVADWTLLAAEIREALPGTALEVTPVPAPERTPAPVG
>Mature_319_residues
AQPQPTLAQLRALVGVADHRHFGRAATSLHVSQPTLSSAVAALERTLGIQLVERTTRSVLLTPVGEEIVQRARGVLGAVD
DIAQLAVRARAPLSGDIRLGVIPTVAPYLLPQLLPSLRARRPEARLRLREAQTSALLEELRGGSLDLALLALPTDEPGVA
ELPLYDEDFVLVTPVDHPMAGSAALPVSSLCGRDLLLLEDGHCFRAQALDVCREAGARERSALRAASLSTIVQMVAGGLG
LTLIPAAAVGVEVGEGRGLATATFRNPAPRRRIGLAYRTTSARVADWTLLAAEIREALPGTALEVTPVPAPERTPAPVG

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=295, Percent_Identity=44.7457627118644, Blast_Score=234, Evalue=6e-63,
Organism=Escherichia coli, GI1788887, Length=255, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1787879, Length=267, Percent_Identity=32.2097378277154, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI157672245, Length=246, Percent_Identity=31.7073170731707, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787530, Length=249, Percent_Identity=30.5220883534137, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI145693105, Length=253, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788748, Length=244, Percent_Identity=26.6393442622951, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI2367136, Length=240, Percent_Identity=27.9166666666667, Blast_Score=88, Evalue=8e-19,
Organism=Escherichia coli, GI1788297, Length=245, Percent_Identity=31.4285714285714, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787601, Length=189, Percent_Identity=29.6296296296296, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1789506, Length=231, Percent_Identity=25.974025974026, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789204, Length=220, Percent_Identity=26.3636363636364, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1790208, Length=241, Percent_Identity=27.3858921161826, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI87081904, Length=175, Percent_Identity=29.1428571428571, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787806, Length=244, Percent_Identity=23.3606557377049, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788296, Length=221, Percent_Identity=26.2443438914027, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1790262, Length=240, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI145693193, Length=101, Percent_Identity=35.6435643564356, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87082132, Length=254, Percent_Identity=22.8346456692913, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33733; Mature: 33602

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPQPTLAQLRALVGVADHRHFGRAATSLHVSQPTLSSAVAALERTLGIQLVERTTRSV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHE
LLTPVGEEIVQRARGVLGAVDDIAQLAVRARAPLSGDIRLGVIPTVAPYLLPQLLPSLRA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC
RRPEARLRLREAQTSALLEELRGGSLDLALLALPTDEPGVAELPLYDEDFVLVTPVDHPM
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCCCCEEEECCCCCCC
AGSAALPVSSLCGRDLLLLEDGHCFRAQALDVCREAGARERSALRAASLSTIVQMVAGGL
CCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
GLTLIPAAAVGVEVGEGRGLATATFRNPAPRRRIGLAYRTTSARVADWTLLAAEIREALP
CHHHHHHHHHCEEECCCCCEEEEECCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCC
GTALEVTPVPAPERTPAPVG
CCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AQPQPTLAQLRALVGVADHRHFGRAATSLHVSQPTLSSAVAALERTLGIQLVERTTRSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHE
LLTPVGEEIVQRARGVLGAVDDIAQLAVRARAPLSGDIRLGVIPTVAPYLLPQLLPSLRA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHC
RRPEARLRLREAQTSALLEELRGGSLDLALLALPTDEPGVAELPLYDEDFVLVTPVDHPM
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCCCCEEEECCCCCCC
AGSAALPVSSLCGRDLLLLEDGHCFRAQALDVCREAGARERSALRAASLSTIVQMVAGGL
CCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
GLTLIPAAAVGVEVGEGRGLATATFRNPAPRRRIGLAYRTTSARVADWTLLAAEIREALP
CHHHHHHHHHCEEECCCCCEEEEECCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHCC
GTALEVTPVPAPERTPAPVG
CCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA