| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tauB [C]
Identifier: 158314113
GI number: 158314113
Start: 2724303
End: 2725076
Strand: Direct
Name: tauB [C]
Synonym: Franean1_2280
Alternate gene names: 158314113
Gene position: 2724303-2725076 (Clockwise)
Preceding gene: 158314112
Following gene: 158314114
Centisome position: 30.33
GC content: 73.0
Gene sequence:
>774_bases GTGTCGACACCGAGCGAACCATCCCCCACCGGCCCCGCGCCGCTGCTGACGCTCACGGCGGCCGGCAAGCGCTTCCCGGA CGGGACGACCGCCCTGACCGGCGTCGACCTGGCCGTGAGCCGCGGTGACTTCGTCAGCCTGGTCGGCCCCTCGGGCTGCG GGAAGAGCACGGTGCTGCGGCTGGCCTCCGGCCTCACCGAGGCCACGGTCGGCGCGGTCGACCGGGCGACGGACCGGATC AGCTACGTCTTCCAGGACCCGACGCTGCTGCCCTGGCGCAGCGTGCGGCGCAACGTCGAGATGCTGGCCGAGGTGACCGG CGTCCCCCGGGACGCCTATCGGCCCACCGCGGCCGAGCTCATCGAGCTGGTGGGTCTCACCGGGTTCGAGCGGCACCGGC CGAGGTCGTTGTCCGGCGGCATGCGGATGCGGGTCTCGCTGGCCCGCTCGCTGGTGCTCGCTCCGGAGCTGCTGCTGCTC GACGAGCCGTTCGGCGCCCTCGACGAGCTCTCCCGCGAGCGGCTCAACGACGAGCTGCTCCGGTTGTTCGGCCTGGGCCG CTTCGGGGCGGCTGTCTTCGTGACGCACTCGGTCGCCGAGGCGGTGTTCCTGTCGACGAAGGTGATCGTGATGTCTCCCC GACCGGGCCGGATCGTCGCCGAGCTGGACGTCCCGTTCCCCTACCCGCGGTCGGCGGACATCCGCTTCACCGACGAGTTC ACCCGGCTGACGGCCCGCGTCTCGCGGCTGCTGCGCGCGGTGGAGCCGGCATGA
Upstream 100 bases:
>100_bases GCCGGCGACGGACCCCGCCGGCGCGGGCGCGACCACCGGCTCCAGCGGGGGCGCGGGAACCGGCTCGGGCCGCGCCGACG CCCGCAGCGAGGGATGAGCG
Downstream 100 bases:
>100_bases CCGCGGACACCACCGCCCCCGCGGAGATCGCCGGCCCCGGACGGGCCGGGCGCCGCCCGTTCTGGCGGTCGGTGGACGTC CTCGGCCCCGTGGCGATGTT
Product: ABC transporter-like protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSTPSEPSPTGPAPLLTLTAAGKRFPDGTTALTGVDLAVSRGDFVSLVGPSGCGKSTVLRLASGLTEATVGAVDRATDRI SYVFQDPTLLPWRSVRRNVEMLAEVTGVPRDAYRPTAAELIELVGLTGFERHRPRSLSGGMRMRVSLARSLVLAPELLLL DEPFGALDELSRERLNDELLRLFGLGRFGAAVFVTHSVAEAVFLSTKVIVMSPRPGRIVAELDVPFPYPRSADIRFTDEF TRLTARVSRLLRAVEPA
Sequences:
>Translated_257_residues MSTPSEPSPTGPAPLLTLTAAGKRFPDGTTALTGVDLAVSRGDFVSLVGPSGCGKSTVLRLASGLTEATVGAVDRATDRI SYVFQDPTLLPWRSVRRNVEMLAEVTGVPRDAYRPTAAELIELVGLTGFERHRPRSLSGGMRMRVSLARSLVLAPELLLL DEPFGALDELSRERLNDELLRLFGLGRFGAAVFVTHSVAEAVFLSTKVIVMSPRPGRIVAELDVPFPYPRSADIRFTDEF TRLTARVSRLLRAVEPA >Mature_256_residues STPSEPSPTGPAPLLTLTAAGKRFPDGTTALTGVDLAVSRGDFVSLVGPSGCGKSTVLRLASGLTEATVGAVDRATDRIS YVFQDPTLLPWRSVRRNVEMLAEVTGVPRDAYRPTAAELIELVGLTGFERHRPRSLSGGMRMRVSLARSLVLAPELLLLD EPFGALDELSRERLNDELLRLFGLGRFGAAVFVTHSVAEAVFLSTKVIVMSPRPGRIVAELDVPFPYPRSADIRFTDEFT RLTARVSRLLRAVEPA
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1116
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=214, Percent_Identity=26.6355140186916, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI27436953, Length=191, Percent_Identity=26.7015706806283, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI153792144, Length=194, Percent_Identity=24.7422680412371, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI6005701, Length=222, Percent_Identity=27.027027027027, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI46592915, Length=153, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI46592956, Length=153, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI46592978, Length=153, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI46592964, Length=153, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI46592898, Length=153, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI46592971, Length=153, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI150417984, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI27477115, Length=188, Percent_Identity=26.063829787234, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI116734710, Length=193, Percent_Identity=26.9430051813472, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI105990541, Length=209, Percent_Identity=28.2296650717703, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI27262624, Length=236, Percent_Identity=23.728813559322, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI27262626, Length=236, Percent_Identity=23.728813559322, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI27881501, Length=197, Percent_Identity=23.3502538071066, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=38.1642512077295, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=36.0869565217391, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI87081791, Length=238, Percent_Identity=33.6134453781513, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1787164, Length=222, Percent_Identity=39.1891891891892, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787712, Length=208, Percent_Identity=38.9423076923077, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI87081709, Length=203, Percent_Identity=36.9458128078818, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1788761, Length=242, Percent_Identity=36.7768595041322, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87082267, Length=230, Percent_Identity=33.9130434782609, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=35.7798165137615, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1789032, Length=192, Percent_Identity=35.4166666666667, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=38.0090497737557, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1788450, Length=207, Percent_Identity=34.2995169082126, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87081834, Length=232, Percent_Identity=33.6206896551724, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1786319, Length=215, Percent_Identity=32.093023255814, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787029, Length=208, Percent_Identity=34.6153846153846, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1789672, Length=240, Percent_Identity=30, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1786703, Length=185, Percent_Identity=36.7567567567568, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787105, Length=202, Percent_Identity=33.6633663366337, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1788053, Length=167, Percent_Identity=36.5269461077844, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786872, Length=203, Percent_Identity=35.9605911330049, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1786398, Length=172, Percent_Identity=34.8837209302326, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789873, Length=193, Percent_Identity=34.1968911917098, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787758, Length=219, Percent_Identity=32.4200913242009, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787500, Length=221, Percent_Identity=29.4117647058824, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1786698, Length=234, Percent_Identity=29.4871794871795, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787089, Length=219, Percent_Identity=30.1369863013699, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=36.1809045226131, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789962, Length=227, Percent_Identity=31.2775330396476, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI48994943, Length=183, Percent_Identity=31.1475409836066, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI87081782, Length=184, Percent_Identity=33.1521739130435, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1790162, Length=206, Percent_Identity=31.0679611650485, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789891, Length=210, Percent_Identity=32.8571428571429, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790544, Length=167, Percent_Identity=31.7365269461078, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788506, Length=225, Percent_Identity=30.2222222222222, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789593, Length=224, Percent_Identity=28.125, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789586, Length=207, Percent_Identity=31.8840579710145, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI145693107, Length=192, Percent_Identity=32.8125, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI48995001, Length=205, Percent_Identity=29.2682926829268, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787792, Length=232, Percent_Identity=27.1551724137931, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788644, Length=237, Percent_Identity=32.9113924050633, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI48994883, Length=218, Percent_Identity=29.8165137614679, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787547, Length=198, Percent_Identity=26.2626262626263, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1789963, Length=271, Percent_Identity=28.0442804428044, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17569143, Length=207, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533608, Length=219, Percent_Identity=23.7442922374429, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17565586, Length=192, Percent_Identity=26.5625, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193211015, Length=167, Percent_Identity=32.3353293413174, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996809, Length=167, Percent_Identity=32.3353293413174, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193211017, Length=167, Percent_Identity=32.3353293413174, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17569145, Length=213, Percent_Identity=30.5164319248826, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17541710, Length=174, Percent_Identity=33.9080459770115, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17510237, Length=209, Percent_Identity=25.8373205741627, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17558664, Length=180, Percent_Identity=31.6666666666667, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983516, Length=202, Percent_Identity=28.2178217821782, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71983510, Length=202, Percent_Identity=28.2178217821782, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71983523, Length=202, Percent_Identity=28.2178217821782, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI116007184, Length=198, Percent_Identity=28.2828282828283, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI221500365, Length=198, Percent_Identity=28.2828282828283, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24581191, Length=177, Percent_Identity=28.8135593220339, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581189, Length=177, Percent_Identity=28.8135593220339, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581193, Length=177, Percent_Identity=28.8135593220339, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581195, Length=177, Percent_Identity=28.8135593220339, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574150, Length=231, Percent_Identity=25.5411255411255, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007328, Length=231, Percent_Identity=25.5411255411255, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85726357, Length=168, Percent_Identity=32.1428571428571, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585091, Length=211, Percent_Identity=32.2274881516588, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI28574259, Length=197, Percent_Identity=30.9644670050761, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17136662, Length=203, Percent_Identity=32.0197044334975, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552437, Length=217, Percent_Identity=29.4930875576037, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24585557, Length=217, Percent_Identity=29.4930875576037, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI281362751, Length=216, Percent_Identity=26.8518518518519, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24582014, Length=182, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24582012, Length=182, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI85725262, Length=205, Percent_Identity=26.3414634146341, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24650855, Length=214, Percent_Identity=27.1028037383178, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650853, Length=214, Percent_Identity=27.1028037383178, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574744, Length=169, Percent_Identity=28.4023668639053, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27798; Mature: 27667
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPSEPSPTGPAPLLTLTAAGKRFPDGTTALTGVDLAVSRGDFVSLVGPSGCGKSTVLR CCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECEEEEECCCCEEEEECCCCCCHHHHHH LASGLTEATVGAVDRATDRISYVFQDPTLLPWRSVRRNVEMLAEVTGVPRDAYRPTAAEL HHHCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH IELVGLTGFERHRPRSLSGGMRMRVSLARSLVLAPELLLLDEPFGALDELSRERLNDELL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHH RLFGLGRFGAAVFVTHSVAEAVFLSTKVIVMSPRPGRIVAELDVPFPYPRSADIRFTDEF HHHCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEECCCCCCCCCCCEEEHHHH TRLTARVSRLLRAVEPA HHHHHHHHHHHHHHCCC >Mature Secondary Structure STPSEPSPTGPAPLLTLTAAGKRFPDGTTALTGVDLAVSRGDFVSLVGPSGCGKSTVLR CCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECEEEEECCCCEEEEECCCCCCHHHHHH LASGLTEATVGAVDRATDRISYVFQDPTLLPWRSVRRNVEMLAEVTGVPRDAYRPTAAEL HHHCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH IELVGLTGFERHRPRSLSGGMRMRVSLARSLVLAPELLLLDEPFGALDELSRERLNDELL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHH RLFGLGRFGAAVFVTHSVAEAVFLSTKVIVMSPRPGRIVAELDVPFPYPRSADIRFTDEF HHHCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEECCCCCCCCCCCEEEHHHH TRLTARVSRLLRAVEPA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]