Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314112

Identifier: 158314112

GI number: 158314112

Start: 2722953

End: 2724299

Strand: Direct

Name: 158314112

Synonym: Franean1_2279

Alternate gene names: NA

Gene position: 2722953-2724299 (Clockwise)

Preceding gene: 158314108

Following gene: 158314113

Centisome position: 30.32

GC content: 72.68

Gene sequence:

>1347_bases
ATGGCCATCGTGTCGCGGTCGCGCGTCCTAAGCGTTGCGATCGCTACGGTTCTGCTGCTGGCGACCGGCTGCTCCGAGGA
TTCGAATTCCAACGGTACCGGGGTTTCCGGCGTCGTCAAGATCGGCCTGTTGGCTCCGCTCGGCGGAGCGAACGCGGAAG
CCGGCCGGGACGCTCAGCGCGGCGCGGATCTCGCCGCCTCGGTCGTCAATGCCGGCGCGGACGCCGATCTCGCCTCGACG
GGCATCTGGGGCGCCAGCCGCGCCGCCTCGCTGTCCATCGTGACAATGGACACAGAAAGCGATCGGCAGCGTGCGGTTGA
TGCTACAGACCGCCTGGTCGCCGAAGAGCACGTCGCCGGCATGGTCGGCGCGTTCGACGCCGAGGCGACGCTGGATGCCA
GCCAACGCGCCGAACGCCTCGGAACACCATTCGTAAGTGGTGACGTTCCGTTGAGTGCGCTAACAGAACGTGGGCTGAAC
TGGTTCTTCCGTTCCGGCCCGGACGTGCGGAGCTTCGGTGGCGCGTTCCTTTCTCTGCTGCGTGGCGCGGAACGGGACGG
CGTCGCCCGTCGGCGGGTGGCCGTTCTTTACGGCGACCGGCCGGAAGGCCACGACCTGCAGGCCATGCTCCAGGAACTGG
CCGAGGAGACCGACGTCGAGCTGGTCGCGCAGGAGCGCTACGCGCCGGGCGACGGGGACCTCACCGACGAGGTGGGCAGG
ATCCGCGCCGCCGCGCCCGACATGGTGCTCTTCGGGGCGCTGCTCGGTGCCGGCCGCGCGCTCGGCGACGCGCTGGGCGG
CCTCGGCTACGCCCCGCCCGGGATCGTCGTCTACGGGGCCGCGGCGGAGGCGGTGCCGCTGGCCTCGATGCCCGGTCTCG
ACGGGCGGGTGAGCCGGCAGGTCGGGTGGTCGTCGCTGGTCGCGCAGGCGAACCCGCTGGCGACCCAGGTGTCGAAGCGC
TACCAGAGCGCCTACGGCGGGCCGATGACAGAGGCCGCCGCGGCCGCGTACACGGCGGTCATGGTGCTGGCCCGGGCGAT
CGGCGCCGCGGGCGGTCTCGAGCCGGAGCAGATCAGGTCGGCGCTGGTGGCGACGAACGTGCCCGGCGCGGAGACGGTCA
TGCCCTGGGAGGGCGTCCGCTTCGACGTGACGCACCAGAACGCGCTGGCCGCGACGGTGGTCGAGCAGGCCACCGGCAGC
CGGTTCGCCGTCGTCTACCCGCGGGAGCTCGCCACGGTCGCCTTCACCTGGCCGGCGACGGACCCCGCCGGCGCGGGCGC
GACCACCGGCTCCAGCGGGGGCGCGGGAACCGGCTCGGGCCGCGCCGACGCCCGCAGCGAGGGATGA

Upstream 100 bases:

>100_bases
TACTCTGACTGCGGTACCGCGTGGACCGCTGTACCGCGTGTCTGAACGAGACCGCGTGTCTGAACGTGCGCCTGGAAGAT
GACGACGTGGGGGACGAGCC

Downstream 100 bases:

>100_bases
GCGGTGTCGACACCGAGCGAACCATCCCCCACCGGCCCCGCGCCGCTGCTGACGCTCACGGCGGCCGGCAAGCGCTTCCC
GGACGGGACGACCGCCCTGA

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MAIVSRSRVLSVAIATVLLLATGCSEDSNSNGTGVSGVVKIGLLAPLGGANAEAGRDAQRGADLAASVVNAGADADLAST
GIWGASRAASLSIVTMDTESDRQRAVDATDRLVAEEHVAGMVGAFDAEATLDASQRAERLGTPFVSGDVPLSALTERGLN
WFFRSGPDVRSFGGAFLSLLRGAERDGVARRRVAVLYGDRPEGHDLQAMLQELAEETDVELVAQERYAPGDGDLTDEVGR
IRAAAPDMVLFGALLGAGRALGDALGGLGYAPPGIVVYGAAAEAVPLASMPGLDGRVSRQVGWSSLVAQANPLATQVSKR
YQSAYGGPMTEAAAAAYTAVMVLARAIGAAGGLEPEQIRSALVATNVPGAETVMPWEGVRFDVTHQNALAATVVEQATGS
RFAVVYPRELATVAFTWPATDPAGAGATTGSSGGAGTGSGRADARSEG

Sequences:

>Translated_448_residues
MAIVSRSRVLSVAIATVLLLATGCSEDSNSNGTGVSGVVKIGLLAPLGGANAEAGRDAQRGADLAASVVNAGADADLAST
GIWGASRAASLSIVTMDTESDRQRAVDATDRLVAEEHVAGMVGAFDAEATLDASQRAERLGTPFVSGDVPLSALTERGLN
WFFRSGPDVRSFGGAFLSLLRGAERDGVARRRVAVLYGDRPEGHDLQAMLQELAEETDVELVAQERYAPGDGDLTDEVGR
IRAAAPDMVLFGALLGAGRALGDALGGLGYAPPGIVVYGAAAEAVPLASMPGLDGRVSRQVGWSSLVAQANPLATQVSKR
YQSAYGGPMTEAAAAAYTAVMVLARAIGAAGGLEPEQIRSALVATNVPGAETVMPWEGVRFDVTHQNALAATVVEQATGS
RFAVVYPRELATVAFTWPATDPAGAGATTGSSGGAGTGSGRADARSEG
>Mature_447_residues
AIVSRSRVLSVAIATVLLLATGCSEDSNSNGTGVSGVVKIGLLAPLGGANAEAGRDAQRGADLAASVVNAGADADLASTG
IWGASRAASLSIVTMDTESDRQRAVDATDRLVAEEHVAGMVGAFDAEATLDASQRAERLGTPFVSGDVPLSALTERGLNW
FFRSGPDVRSFGGAFLSLLRGAERDGVARRRVAVLYGDRPEGHDLQAMLQELAEETDVELVAQERYAPGDGDLTDEVGRI
RAAAPDMVLFGALLGAGRALGDALGGLGYAPPGIVVYGAAAEAVPLASMPGLDGRVSRQVGWSSLVAQANPLATQVSKRY
QSAYGGPMTEAAAAAYTAVMVLARAIGAAGGLEPEQIRSALVATNVPGAETVMPWEGVRFDVTHQNALAATVVEQATGSR
FAVVYPRELATVAFTWPATDPAGAGATTGSSGGAGTGSGRADARSEG

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 45564; Mature: 45433

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVSRSRVLSVAIATVLLLATGCSEDSNSNGTGVSGVVKIGLLAPLGGANAEAGRDAQR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
GADLAASVVNAGADADLASTGIWGASRAASLSIVTMDTESDRQRAVDATDRLVAEEHVAG
HHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
MVGAFDAEATLDASQRAERLGTPFVSGDVPLSALTERGLNWFFRSGPDVRSFGGAFLSLL
HHHCCCCCHHCCHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHHH
RGAERDGVARRRVAVLYGDRPEGHDLQAMLQELAEETDVELVAQERYAPGDGDLTDEVGR
HCCCCCCHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
IRAAAPDMVLFGALLGAGRALGDALGGLGYAPPGIVVYGAAAEAVPLASMPGLDGRVSRQ
HHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH
VGWSSLVAQANPLATQVSKRYQSAYGGPMTEAAAAAYTAVMVLARAIGAAGGLEPEQIRS
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ALVATNVPGAETVMPWEGVRFDVTHQNALAATVVEQATGSRFAVVYPRELATVAFTWPAT
HHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCC
DPAGAGATTGSSGGAGTGSGRADARSEG
CCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIVSRSRVLSVAIATVLLLATGCSEDSNSNGTGVSGVVKIGLLAPLGGANAEAGRDAQR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
GADLAASVVNAGADADLASTGIWGASRAASLSIVTMDTESDRQRAVDATDRLVAEEHVAG
HHHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
MVGAFDAEATLDASQRAERLGTPFVSGDVPLSALTERGLNWFFRSGPDVRSFGGAFLSLL
HHHCCCCCHHCCHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHHH
RGAERDGVARRRVAVLYGDRPEGHDLQAMLQELAEETDVELVAQERYAPGDGDLTDEVGR
HCCCCCCHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
IRAAAPDMVLFGALLGAGRALGDALGGLGYAPPGIVVYGAAAEAVPLASMPGLDGRVSRQ
HHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHH
VGWSSLVAQANPLATQVSKRYQSAYGGPMTEAAAAAYTAVMVLARAIGAAGGLEPEQIRS
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ALVATNVPGAETVMPWEGVRFDVTHQNALAATVVEQATGSRFAVVYPRELATVAFTWPAT
HHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCC
DPAGAGATTGSSGGAGTGSGRADARSEG
CCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA