Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158314067

Identifier: 158314067

GI number: 158314067

Start: 2671703

End: 2672227

Strand: Direct

Name: 158314067

Synonym: Franean1_2234

Alternate gene names: NA

Gene position: 2671703-2672227 (Clockwise)

Preceding gene: 158314066

Following gene: 158314068

Centisome position: 29.74

GC content: 69.14

Gene sequence:

>525_bases
ATGTCGATTGGACACGCGCTGCTCGGGCTCCTCGAGTCCGGCCCGCGACACGGCTACGACCTCAAACGGTCCTACGACGA
CCGGTTCGGGCACGACCGGCCGCTCCATTACGGGCAGGTCTACGCGACCCTGGCCAGGCTGCTGAAGAACGGCCTGGTGG
AGGTCGACGGCGTCACGCCTGGCGGCGGTCCCGACCGCAAGCGCTACGCGATCACCGACACCGGTATCGCCGACGTCGAA
CGCTGGCTGGCTCAGCCCGAGAAGCCCGATCTCTACCTGCAGAGCACGCTCTACACGAAGATCGTGCTCGCACTGCTGAC
CGGGCGGCCCGCGGTCGACCTCCTGGACGCCCAGCGCTCCGAGCACCTTCGGCTGATGCGCGAGCTCACTCGGCGCAAGG
TCGGCGGAGACCTGGCCGACCAGCTCGTCTGCGACCACGCGCTGTTCCACCTCGAGGCCGATCTCCGGTTCCTGGAGCTG
GCCGCGGCCCGCCTCGACCAGCTCGCGGCGAAGGTCCGCTCATGA

Upstream 100 bases:

>100_bases
CGACATCCCGCCCGGCGGTTGATGGCGGTGTCGTGGGAGCGTCCGCCGGCCTGTACCCCTCTATACGCGGCATGTATACA
TCTAATGTATAGTCGCGATC

Downstream 100 bases:

>100_bases
CGGGCGCGACCGCCGAGACCGGCGCAGGCGCAGGCACCACTGCCACCCACGCCGGCGGAACGCGGCCCGTGGACGCCGCT
GCCGTCGCACCGCTGCTGCG

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR Family Transcriptional Regulator; PadR-Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator PadR Family; Transcriptional Regulator-Like Protein; PadR-Like Transcriptional Regulator; PadR Family Regulator; Secreted Protein

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTPGGGPDRKRYAITDTGIADVE
RWLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRSEHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLEL
AAARLDQLAAKVRS

Sequences:

>Translated_174_residues
MSIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTPGGGPDRKRYAITDTGIADVE
RWLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRSEHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLEL
AAARLDQLAAKVRS
>Mature_173_residues
SIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTPGGGPDRKRYAITDTGIADVER
WLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRSEHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLELA
AARLDQLAAKVRS

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19451; Mature: 19319

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTP
CCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCC
GGGPDRKRYAITDTGIADVERWLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRS
CCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLELAAARLDQLAAKVRS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIGHALLGLLESGPRHGYDLKRSYDDRFGHDRPLHYGQVYATLARLLKNGLVEVDGVTP
CHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCC
GGGPDRKRYAITDTGIADVERWLAQPEKPDLYLQSTLYTKIVLALLTGRPAVDLLDAQRS
CCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
EHLRLMRELTRRKVGGDLADQLVCDHALFHLEADLRFLELAAARLDQLAAKVRS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA