| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is khtT [H]
Identifier: 158314057
GI number: 158314057
Start: 2660847
End: 2661407
Strand: Direct
Name: khtT [H]
Synonym: Franean1_2224
Alternate gene names: 158314057
Gene position: 2660847-2661407 (Clockwise)
Preceding gene: 158314055
Following gene: 158314058
Centisome position: 29.62
GC content: 70.94
Gene sequence:
>561_bases GTGCCCGACCGGGTGTCCCGGGCCCGGTCGGCGTCCTCCCGGAACGACGCGTCAGCGCTGACGGAGGCTCAGGAAGAAGT GGACGTCGAGGAGACCCCGCTGCCCGGGATCGGGCTGCGGCACGACTTCAGTACCCGCTCGGGCCGCCGGCTCGGCGTGG TGAGCCGCCACGACGGACGTCGTGACCTGGTCATCTACGATGCGGAGGATCCGGACGCATCCCGCGAGTCGATAACACTC ACCCCAGAGGAGGGGGACGTGCTCTCCGAGCTGCTCGGCGCTCCGCACATCGTGGAGAAGCTCGCCGACATCTCGCGCGC GTTCGCCGGCCTCGTCGGTGAGCAGATCGAGATAACCGCGGGCTCCCCGTACGCGAACCGCATACTCGGCGACACCCAGG CGCGTACCCGCACCGGCGCGTCCATCGTCGCCGTCGTCCGGGATCACCAGGTCCTCGCGTCGCCGCGCCCGGACTTCCAG TTCCACCCCGGGGACGTCGTGGTCGTCGTCGGTACCCCGGAGAACACCGCCGCCGTCGCCCAGCTGCTGCGCGCTGGCTG A
Upstream 100 bases:
>100_bases CCCGGATCGGACGGACCGGGGCCGATCGGTCCCCGGCGGGCTACTGTGACGATCGGAAGCGGGACCGGCGGCGGGCCCGG CGGGCGGCGGGGGGGCGTCA
Downstream 100 bases:
>100_bases CGGGGAACGGGCGACCGACGACACGTGCACGACACGGCGAGGATCTTCCTCGAGCTGGGCGCGGTGCTGTTCGCACTGGG AGTGCTCGGCCATTTCGCGT
Product: TrkA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPDRVSRARSASSRNDASALTEAQEEVDVEETPLPGIGLRHDFSTRSGRRLGVVSRHDGRRDLVIYDAEDPDASRESITL TPEEGDVLSELLGAPHIVEKLADISRAFAGLVGEQIEITAGSPYANRILGDTQARTRTGASIVAVVRDHQVLASPRPDFQ FHPGDVVVVVGTPENTAAVAQLLRAG
Sequences:
>Translated_186_residues MPDRVSRARSASSRNDASALTEAQEEVDVEETPLPGIGLRHDFSTRSGRRLGVVSRHDGRRDLVIYDAEDPDASRESITL TPEEGDVLSELLGAPHIVEKLADISRAFAGLVGEQIEITAGSPYANRILGDTQARTRTGASIVAVVRDHQVLASPRPDFQ FHPGDVVVVVGTPENTAAVAQLLRAG >Mature_185_residues PDRVSRARSASSRNDASALTEAQEEVDVEETPLPGIGLRHDFSTRSGRRLGVVSRHDGRRDLVIYDAEDPDASRESITLT PEEGDVLSELLGAPHIVEKLADISRAFAGLVGEQIEITAGSPYANRILGDTQARTRTGASIVAVVRDHQVLASPRPDFQF HPGDVVVVVGTPENTAAVAQLLRAG
Specific function: Modulates the activity of the potassium/proton antiporter yhaU. The transporter is composed of the integral membrane protein yhaU and the regulatory protein khtT [H]
COG id: COG0490
COG function: function code P; Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK C-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006037 [H]
Pfam domain/function: PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 19925; Mature: 19794
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDRVSRARSASSRNDASALTEAQEEVDVEETPLPGIGLRHDFSTRSGRRLGVVSRHDGR CCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC RDLVIYDAEDPDASRESITLTPEEGDVLSELLGAPHIVEKLADISRAFAGLVGEQIEITA CEEEEEECCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEE GSPYANRILGDTQARTRTGASIVAVVRDHQVLASPRPDFQFHPGDVVVVVGTPENTAAVA CCCHHHHHHCCCHHHHHCCCEEEEEEECCHHCCCCCCCCEECCCCEEEEEECCCCHHHHH QLLRAG HHHHCC >Mature Secondary Structure PDRVSRARSASSRNDASALTEAQEEVDVEETPLPGIGLRHDFSTRSGRRLGVVSRHDGR CCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC RDLVIYDAEDPDASRESITLTPEEGDVLSELLGAPHIVEKLADISRAFAGLVGEQIEITA CEEEEEECCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEE GSPYANRILGDTQARTRTGASIVAVVRDHQVLASPRPDFQFHPGDVVVVVGTPENTAAVA CCCHHHHHHCCCHHHHHCCCEEEEEEECCHHCCCCCCCCEECCCCEEEEEECCCCHHHHH QLLRAG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]