Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158314050

Identifier: 158314050

GI number: 158314050

Start: 2653127

End: 2653468

Strand: Direct

Name: 158314050

Synonym: Franean1_2217

Alternate gene names: NA

Gene position: 2653127-2653468 (Clockwise)

Preceding gene: 158314048

Following gene: 158314052

Centisome position: 29.54

GC content: 65.79

Gene sequence:

>342_bases
GTGACGTGTCCGTCCCCCCACCGGAACGCCACCGGACACCTTGCCTGCAACGCAGCTATTTCAGCAGACCGGCACCTGGC
GTTACCAACAGGTTCCCGGACGCATCAGGTCCGGCGGGCATTCCGGTCCAGTTCGGTGACCGACCGTGCCGTCCGCGACC
GGGTGGTGGCGGGTCTCGGGGCGGGTGTCGCACCGGAGAAGCAGCACTGGGCCGATCATTGCCGTCGCACCTACCAGCCG
ATCTTACGGGTGGCTCGAATTCGACTACGGACCGTGGGTGGCGAGCGTTGCGGTAGCTGTCGGTGGCCGCGAGTGCGGTC
CGTCATCATCGTTATCATGTGA

Upstream 100 bases:

>100_bases
CAGCGGCGACCGAGATGAGCCTGCTCACCGCGTGGTCGACTCCCGCTGTGTTGCGCTGTGGGTCACGTCGCTCCCGTTCT
GCCCGCCGTCGGGCATACGC

Downstream 100 bases:

>100_bases
TCGCTGACGGTGTCCGTCTCGGTGGGTCAGCGGGCGTTGTCGGCTGACGGGCTGCCGGCGGCGGCCCGTCACGGCCCCGG
GCGGCCCCACCTGTCGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MTCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLGAGVAPEKQHWADHCRRTYQP
ILRVARIRLRTVGGERCGSCRWPRVRSVIIVIM

Sequences:

>Translated_113_residues
MTCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLGAGVAPEKQHWADHCRRTYQP
ILRVARIRLRTVGGERCGSCRWPRVRSVIIVIM
>Mature_112_residues
TCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLGAGVAPEKQHWADHCRRTYQPI
LRVARIRLRTVGGERCGSCRWPRVRSVIIVIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12545; Mature: 12413

Theoretical pI: Translated: 12.17; Mature: 12.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLG
CCCCCCCCCCCCCEEECCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC
AGVAPEKQHWADHCRRTYQPILRVARIRLRTVGGERCGSCRWPRVRSVIIVIM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
TCPSPHRNATGHLACNAAISADRHLALPTGSRTHQVRRAFRSSSVTDRAVRDRVVAGLG
CCCCCCCCCCCCEEECCCCCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC
AGVAPEKQHWADHCRRTYQPILRVARIRLRTVGGERCGSCRWPRVRSVIIVIM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA