| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158313905
Identifier: 158313905
GI number: 158313905
Start: 2494351
End: 2494827
Strand: Direct
Name: 158313905
Synonym: Franean1_2070
Alternate gene names: NA
Gene position: 2494351-2494827 (Clockwise)
Preceding gene: 158313904
Following gene: 158313910
Centisome position: 27.77
GC content: 67.51
Gene sequence:
>477_bases GTGAGCTCCGGCCGGCGGCCGCCGCGTCGCCCGATCCGCGGCCGCGGTGCCGCGGTCCGGTGGGCCGCGACGGTGAGAGG AGGAATGGTGGACCCCGACTTCCCGTTGCTCAGTGTCTTCCTTTACATGCTGTGGTTCTTCTGTTTCACGATGTGGCTGT TCCTGATGTTCACGGTGATCACGGACGTCTTCCGCAGCCATGATCTCTCCGGCTGGGGCAAGGCCGGCTGGACGGTGCTG ATCATTGTCCTGCCGCTGATCGGTTTGCTGGCCTACCTGATCGTCAGGGGCAGCTCCATGCACGACCGCCAGGCCCGGCA GGCGGCATCCCAGGCCGACATGTGGCGCACCGAGGTCCGCGCGGCCGCCGGCCGGCCGAGCGCCGCCGACGAGCTCAGCC GGCTTGCGGACCTCCGCGACCACGGAGTCATCAGCACCAACGAGTTCGAACGGGAGAAGACGAAGATCCTGGCCTGA
Upstream 100 bases:
>100_bases CGGTTCACCCCCGCTGGGTGAGCGTGGCGGTGCGCCGCGGCGCGCCGAGTGGGTATGAGTCGGGTCTCGCCGGCAGGTCG GTCACGCCGGCGGAGTGCCC
Downstream 100 bases:
>100_bases ACGAGATCCCGGCCTGAACCGGGCACGGCCGGCTTCCCCCGGCCGCCACTGCCTCCCGCAGGGGTCGCGCCTGTCCGCGA CCTCCGCGGGAGTTTCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSSGRRPPRRPIRGRGAAVRWAATVRGGMVDPDFPLLSVFLYMLWFFCFTMWLFLMFTVITDVFRSHDLSGWGKAGWTVL IIVLPLIGLLAYLIVRGSSMHDRQARQAASQADMWRTEVRAAAGRPSAADELSRLADLRDHGVISTNEFEREKTKILA
Sequences:
>Translated_158_residues MSSGRRPPRRPIRGRGAAVRWAATVRGGMVDPDFPLLSVFLYMLWFFCFTMWLFLMFTVITDVFRSHDLSGWGKAGWTVL IIVLPLIGLLAYLIVRGSSMHDRQARQAASQADMWRTEVRAAAGRPSAADELSRLADLRDHGVISTNEFEREKTKILA >Mature_157_residues SSGRRPPRRPIRGRGAAVRWAATVRGGMVDPDFPLLSVFLYMLWFFCFTMWLFLMFTVITDVFRSHDLSGWGKAGWTVLI IVLPLIGLLAYLIVRGSSMHDRQARQAASQADMWRTEVRAAAGRPSAADELSRLADLRDHGVISTNEFEREKTKILA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17854; Mature: 17723
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGRRPPRRPIRGRGAAVRWAATVRGGMVDPDFPLLSVFLYMLWFFCFTMWLFLMFTVI CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TDVFRSHDLSGWGKAGWTVLIIVLPLIGLLAYLIVRGSSMHDRQARQAASQADMWRTEVR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AAAGRPSAADELSRLADLRDHGVISTNEFEREKTKILA HHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SSGRRPPRRPIRGRGAAVRWAATVRGGMVDPDFPLLSVFLYMLWFFCFTMWLFLMFTVI CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TDVFRSHDLSGWGKAGWTVLIIVLPLIGLLAYLIVRGSSMHDRQARQAASQADMWRTEVR HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH AAAGRPSAADELSRLADLRDHGVISTNEFEREKTKILA HHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA