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The map label for this gene is whiA [H]

Identifier: 158313897

GI number: 158313897

Start: 2485438

End: 2486433

Strand: Direct

Name: whiA [H]

Synonym: Franean1_2062

Alternate gene names: 158313897

Gene position: 2485438-2486433 (Clockwise)

Preceding gene: 158313896

Following gene: 158313898

Centisome position: 27.67

GC content: 75.7

Gene sequence:

>996_bases
GTGATCGGTGTGGCGGCGATGACGGCCACCGTCAAGGACGAACTGAGCAGGCTGCGAGTGGCCAAGCCCTGTTGCCGGCG
GGCCGAGATGGCGGCGATGCTGCGGTTCGCCGGCGGTCTGCACATCGTCGGCGGCCGCATCGTGGTGGAGGCCGAGCTCG
ACACCGGCGCCACCGCGCGCCGGCTGCGGCGTGAGATCGCCGAGGTCTTCGGCTTCCCGTCGTCGGTGGCCGTGCTCGCG
GCCGGCGGCCTGCGGCGGTCGGTGCGCTACATCGTCCGCGTCGAGCGGGACGGAGAACAGCTCGCCCGGTCGACGGGCCT
GCTCGACCAGCGCGGCCGGCCGGTGCGCGGCCTGCCGCCGCAGGTGGTGACCGGTTCGGCGTGCGACGCGGCGGCGGCCT
GGCGGGGCGCGTTCCTCGCGCACGGCTCGCTGACCGAGCCCGGCCGGTCCTGCTCGATGGAGGTCACCTCGCCCGGCCCG
GAGGCGGCGCTGGCGCTTGTCGGCGCCGCCCGGCGGATGGGCGTGCAGGCCAAGAGCCGGGACGTCCGCGGCGTCGACCG
CGTGGTCGTCCGGGACGGAGACGCCATCGGCGCGCTGCTGACCAAGATCGGTGCGCATGACAGCCTGATGGCCTGGGAGG
AGCGGCGGATGCGCCGCGAGGTCCGGGCCACGGCGAACCGGCTGGCGAACTTCGACGACGCGAACCTGCGCCGCTCGGCG
CGCGCCGCGGTGGCCGCCGGCGCGCGGGTGCAGGCGGCGATGCGCATCCTCGGGGACGACGCCCCCGACCACCTGCTCGC
GGCCGGGCGCCTGCGCCTGGAGCACGCGCAGGCGTCGTTGGAGGAGCTCGGCGCGCTCGCGGACCCGCCGCTCACCAAGG
ATGCCGTCGCCGGGCGGATCCGCCGGCTCCTCGCGCTGGCGGACAAACGGGCCAACGCGCTGGGCATCCCCAACACTGAG
GCGAGTGTGTCGCCGGAGCTGTTCGAGAACGCCTGA

Upstream 100 bases:

>100_bases
CTGGCCGGCAGCCGGGAGCGGCCTGTGCCGACCCCTCGGGTGTCGGGTGCTCATCCACCGGTGGCTCCGGCCACCGGATC
CCCTCCGGTGAATGCAAGGA

Downstream 100 bases:

>100_bases
GCACGCAATCGCTACCACGGACGGGGCACAGCGAGAGACCCGGTACGCGGCGTGGCCGTGGAAGCCCATGGGATAGGGTG
ATTGTCGAAACGGCGAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MIGVAAMTATVKDELSRLRVAKPCCRRAEMAAMLRFAGGLHIVGGRIVVEAELDTGATARRLRREIAEVFGFPSSVAVLA
AGGLRRSVRYIVRVERDGEQLARSTGLLDQRGRPVRGLPPQVVTGSACDAAAAWRGAFLAHGSLTEPGRSCSMEVTSPGP
EAALALVGAARRMGVQAKSRDVRGVDRVVVRDGDAIGALLTKIGAHDSLMAWEERRMRREVRATANRLANFDDANLRRSA
RAAVAAGARVQAAMRILGDDAPDHLLAAGRLRLEHAQASLEELGALADPPLTKDAVAGRIRRLLALADKRANALGIPNTE
ASVSPELFENA

Sequences:

>Translated_331_residues
MIGVAAMTATVKDELSRLRVAKPCCRRAEMAAMLRFAGGLHIVGGRIVVEAELDTGATARRLRREIAEVFGFPSSVAVLA
AGGLRRSVRYIVRVERDGEQLARSTGLLDQRGRPVRGLPPQVVTGSACDAAAAWRGAFLAHGSLTEPGRSCSMEVTSPGP
EAALALVGAARRMGVQAKSRDVRGVDRVVVRDGDAIGALLTKIGAHDSLMAWEERRMRREVRATANRLANFDDANLRRSA
RAAVAAGARVQAAMRILGDDAPDHLLAAGRLRLEHAQASLEELGALADPPLTKDAVAGRIRRLLALADKRANALGIPNTE
ASVSPELFENA
>Mature_331_residues
MIGVAAMTATVKDELSRLRVAKPCCRRAEMAAMLRFAGGLHIVGGRIVVEAELDTGATARRLRREIAEVFGFPSSVAVLA
AGGLRRSVRYIVRVERDGEQLARSTGLLDQRGRPVRGLPPQVVTGSACDAAAAWRGAFLAHGSLTEPGRSCSMEVTSPGP
EAALALVGAARRMGVQAKSRDVRGVDRVVVRDGDAIGALLTKIGAHDSLMAWEERRMRREVRATANRLANFDDANLRRSA
RAAVAAGARVQAAMRILGDDAPDHLLAAGRLRLEHAQASLEELGALADPPLTKDAVAGRIRRLLALADKRANALGIPNTE
ASVSPELFENA

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 35178; Mature: 35178

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVAAMTATVKDELSRLRVAKPCCRRAEMAAMLRFAGGLHIVGGRIVVEAELDTGATAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCHHHH
RLRREIAEVFGFPSSVAVLAAGGLRRSVRYIVRVERDGEQLARSTGLLDQRGRPVRGLPP
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHCCCCCCCCCC
QVVTGSACDAAAAWRGAFLAHGSLTEPGRSCSMEVTSPGPEAALALVGAARRMGVQAKSR
CCEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHCC
DVRGVDRVVVRDGDAIGALLTKIGAHDSLMAWEERRMRREVRATANRLANFDDANLRRSA
CCCCHHEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RAAVAAGARVQAAMRILGDDAPDHLLAAGRLRLEHAQASLEELGALADPPLTKDAVAGRI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RRLLALADKRANALGIPNTEASVSPELFENA
HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MIGVAAMTATVKDELSRLRVAKPCCRRAEMAAMLRFAGGLHIVGGRIVVEAELDTGATAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCHHHH
RLRREIAEVFGFPSSVAVLAAGGLRRSVRYIVRVERDGEQLARSTGLLDQRGRPVRGLPP
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCHHHCCCCCCCCCC
QVVTGSACDAAAAWRGAFLAHGSLTEPGRSCSMEVTSPGPEAALALVGAARRMGVQAKSR
CCEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHCC
DVRGVDRVVVRDGDAIGALLTKIGAHDSLMAWEERRMRREVRATANRLANFDDANLRRSA
CCCCHHEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RAAVAAGARVQAAMRILGDDAPDHLLAAGRLRLEHAQASLEELGALADPPLTKDAVAGRI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
RRLLALADKRANALGIPNTEASVSPELFENA
HHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA